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PLM1_60_b1_redo_sep16_scaffold_144_34

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(34167..34940)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Streptomyces sulphureus RepID=UPI0003663AAD similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 248.0
  • Bit_score: 353
  • Evalue 1.20e-94
RNA polymerase sigma factor {ECO:0000313|EMBL:EST29360.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 260.0
  • Bit_score: 353
  • Evalue 2.10e-94
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 253.0
  • Bit_score: 351
  • Evalue 1.20e-94

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Taxonomy

Streptomyces niveus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 774
GTGAGCGACGATCACAAGGAGACGCCCTCGGAATCGCGGGCTCTCTTCCTGGAGTACGTCGCGCTGCCGGAGGATTCGCCGCGCCGGCAGACGCTCCGCGACGAGCTGGTGACGATGCACCTGCCGCTCGCCCGCCACCTCGCCCGCCGCTTCAACAACCGCGGCGAGCCCCTGGAAGATCTGACCCAGGTCGCCACGGTCGGGCTGATCAACTCCGTCGACCGGTTCGACCCCGAGCGCGGCGTGGAGTTCCTGTCCTACGCGGTGCCCACGATCGTCGGCGAGATCAAGCGCCACTTCCGCGACCACGGCTGGGCCGTCCGGGTGCCGCGCCGGCTCAAGGAGCTGCACCTCTCCCTCAACTCGGCCGTCGCCGAACTGTCCCAGCGCAACGGGCGCGCGCCGACGGCCACCGAGCTCGCCGCGTACCTCAAGATCTCGCGCGAAGAGGTACTCGAAGGGCTCGAGGCCGCCAACGCTTACCGCAGCAGCTCGCTGGAGGATCCGGTCCGCGGCGACGAGAGCCTCCCGACGCTCGCCAACACCCTCGGCGACGAGGACAAGGAGCTCGAGGGCGTCGAGTTCCGAGAGTCCCTGCAGCCGCTGCTGAAGCAGATCGCGCCGCGCGAGCGCCGGATCGTCATCCTGCGGTTCTTCGGCAACATGACCCAGTCCCAGATCGCCGAGCAGCTCGGCATCTCCCAGATGCACGTCTCCCGGTTGCTCGCCCAGACGCTGGCGCAGCTGCGGGAGAAGCTCCTCGTCGACGAGTGA
PROTEIN sequence
Length: 258
VSDDHKETPSESRALFLEYVALPEDSPRRQTLRDELVTMHLPLARHLARRFNNRGEPLEDLTQVATVGLINSVDRFDPERGVEFLSYAVPTIVGEIKRHFRDHGWAVRVPRRLKELHLSLNSAVAELSQRNGRAPTATELAAYLKISREEVLEGLEAANAYRSSSLEDPVRGDESLPTLANTLGDEDKELEGVEFRESLQPLLKQIAPRERRIVILRFFGNMTQSQIAEQLGISQMHVSRLLAQTLAQLREKLLVDE*