ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_144_38

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(37446..38684)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 Tax=Frankia sp. (strain CcI3) RepID=Q2JFU0_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 366.0
  • Bit_score: 229
  • Evalue 5.30e-57
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 366.0
  • Bit_score: 229
  • Evalue 1.50e-57
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABD09852.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 366.0
  • Bit_score: 229
  • Evalue 7.40e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGGACACTGAGCTGGAGCCGCCCATGTCGACGTTCGCGCACCCGCTGGCGTACGTCCGTTCGGTGCGCGGCTGGTCCGCCGCAGATCTGCTCGACCTCCTCGCCGAGCACGCCGGCGCGCAGCTGGACGGCCGGCTCGGCGCTACCGACCGCAACAAGGTGCATCGCTGGGAGAAGCGCGGCGTGGTGCCCGAGTTGCCCCTCCAGCACGCCCTGGCGCACCTGCTGGACGTGCCCGTTGACCGGATCGCGCGGCATCCGTGGCCGCGCTGGCTGCCGGCGTTCGGCGGGCTCCGCCCGCTGGACGGCTGGTCGCCGGGCAGCGCGCTCGGGGCCCTCGACGATGTACTCGTCGCCGACGCCGCCGATCCGCGCGCCTACCTGTGCATCACCGGTGCGCCGCTGCGCGCGCTGGGCACCGGCTGGCTGGACGCCCGTCCGACGCACGTCACCGCCGTAGCACGCAGTCCGCTGCGAGTCGAGGAGGAGACCATCGGCCGTATCGAGCGCCACGCCGATGTACTGCGCGCCCTCGACCAGCGCCTCGCCGGGCCTACCGTCGCGGCGGCCGTCTACGCCCAGCTCAGGCTCGTTGCTGCGCTGCTCGCCGAGGGGTCGTTCACCGCGCGGGTCGCCCGGCGCCTCTTCCTGGCCGTCGCCGACCTCGCGCACCTCGCCGGTTGGGCGGCCGTCGACGCCGGACGGCATTTCGCCGCCCAGCGCTACCACCGCGCGGCCCTGTACGCAGCGCACGCGGCCGGCGACCGCACCCTCGGCGGCTACCTGCTGATCTGCCTCGCCTACCAGGCCATCCACCACGGCGAGCCCGGCGACGCGCTGCGCCTCGCGGAGAGCGCCGTCCACGGGGTGCGGGGTGCGCCGTCCGCCCGAGCCCGTGGGCTCCTCGGCGGGCACCTCGCCGTAATCCGCGCCGCCACGGGCCGCCTCCCGGCGGGCGGCGTTCCCGAGCCCCAGGAGCTCCTCCCCGGACCGCACGACCCGCCGTGGGCGCGCTGGTTCGACATCCCGACGTTCACCGCTCGGCGGTACCTGCTGGTGGACCACGGCGACCGGCCGCTGACCGAGCCCGTCGTAGGACGGCTCGCCGCTACCGAGCCCGCGCCGCCACTAGGCCGTCACCGGCGGCTCCACCAGCTGGCCGAACGTCTGGCCACCGGCACTGCCTCGCTCCGGGCCATCCGCGACAGCCTCGACGAGCTACTCCCGCCGGCCGCGTGA
PROTEIN sequence
Length: 413
MDTELEPPMSTFAHPLAYVRSVRGWSAADLLDLLAEHAGAQLDGRLGATDRNKVHRWEKRGVVPELPLQHALAHLLDVPVDRIARHPWPRWLPAFGGLRPLDGWSPGSALGALDDVLVADAADPRAYLCITGAPLRALGTGWLDARPTHVTAVARSPLRVEEETIGRIERHADVLRALDQRLAGPTVAAAVYAQLRLVAALLAEGSFTARVARRLFLAVADLAHLAGWAAVDAGRHFAAQRYHRAALYAAHAAGDRTLGGYLLICLAYQAIHHGEPGDALRLAESAVHGVRGAPSARARGLLGGHLAVIRAATGRLPAGGVPEPQELLPGPHDPPWARWFDIPTFTARRYLLVDHGDRPLTEPVVGRLAATEPAPPLGRHRRLHQLAERLATGTASLRAIRDSLDELLPPAA*