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PLM1_60_b1_redo_sep16_scaffold_3458_9

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 7972..8397

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 141.0
  • Bit_score: 162
  • Evalue 3.80e-37
hypothetical protein Tax=Demetria terragena RepID=UPI00037CA755 similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 141.0
  • Bit_score: 162
  • Evalue 1.60e-37
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 141.0
  • Bit_score: 162
  • Evalue 7.70e-38

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Taxonomy

Nocardia brasiliensis → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GTGATCGCCTACTTCGACACCTCGGCATTCGTTCCGATGCTCGTCGCCGAGCCCACGTCCGAGGTGTGCAAGCGGCTCTGGGAGGACGCAGACGCCGTGGCGACCAGCCGCTTGCTCTATGTCGAAGCCTGCGCGGCTGTCGCCCAGGCGCTGCGGATGGGGAGGCTCACGGACCCAGAGCACCGGTCTGCGGTACGCCTTCTGGACGAGCTGTGGGATGCCTTCGAGGTGGTGGAGGCTGACGAGTTCACCACGAAACGAGCAGCCCGGATCGCCCGTGTGTTCGAGCTGCGCGGCTACGACGCGATGCACTGCGCCTCGGCCGAGCAGTTCGCCGACGACGACTTCGTCGTGGCCAGCGGCGACCGGCGGCTGCTGGAGGCCTGTGCCCGGCTCAGCCTGGCCACCGCCGACGTGACGGCGTAG
PROTEIN sequence
Length: 142
VIAYFDTSAFVPMLVAEPTSEVCKRLWEDADAVATSRLLYVEACAAVAQALRMGRLTDPEHRSAVRLLDELWDAFEVVEADEFTTKRAARIARVFELRGYDAMHCASAEQFADDDFVVASGDRRLLEACARLSLATADVTA*