ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_416_24

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 29498..30655

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI0003800EF6 similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 331.0
  • Bit_score: 242
  • Evalue 5.70e-61
Putative prophage phiRv2 integrase {ECO:0000313|EMBL:KJF15997.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 377.0
  • Bit_score: 253
  • Evalue 3.40e-64
integrase protein similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 399.0
  • Bit_score: 230
  • Evalue 6.30e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithrix ferrooxidans → Acidithrix → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGATCCGGGACCGCGGTGGCTACTGGCAGGTCAAGGTCTACGTCGGCCTCGACCCGCTGACCGGCAGGCATCGGTTCGAGTACGACCGCGCCCGCACCAAGCGCGAGGCCGTGCGCGTCGAGGCCGCCCTGAAGGCCAAGGTGACCGAGGGCCGCCAGCGCGCCACCGCGGCCCGGACGGTCGCCGACCTGGTGGAGCGCTGGTACCAGTGGCGCCAGGGCGTGAAGGAGATCTCCCCCACCACCCTGGAGGGCTACCGGCGCCAGATCGACCAGCGCATCCTCCCCGCGCTCGGCCGCATCCCCGTCCGCCGCCTGGACGTGGAGACGCTGGACACCTTCTACGCCGAGCTGCGCCGCCGCGGCAGGGCCGGCGGCCGGCCCCTGTCGGCCAGCACCGTCCGGGCCGTCCACACCGTCCTGTCGGGGTCGTTACGGCAGGCGGTGGCGTGGGGCTGGATCGCCCACAACCCGGCGCGGCTGGCCACGCCCCCGGCCGTGCAGCGCAGCGACGTGACGCCCCCACCCGTCGACCAAGTGGCCGGGCTACTGGCCACGGCGCTTGAGCGCAACCCCAAGCTGGGGCTGTTCCTGCGGTTGGCAGTGGTGCTGGGCGCCCGGCGCGGGGAGCTGTGCGGGCTGCGCTGGCAGGCTATCGACCTGGACCGTGGGGAGGTGCTGTTGGAGCGGGGCGTGGTGTATGTGACCGGCCAGCCGCTGATCGACAAGGCGACCAAGACCCGCAGCAAGCGGCGGCTGGCGCTGGACGCCAAGACGGTCGAGCTGCTCCGCGCCCACCGGCAGCGCGCCGAGCAGATCGCCGGTGAGCTGGGCTTTGCCCTGCCGGCCAGCGCGTACGTCTTCAGCCGGGAGCCGGACGGGTCGCGGCCGATCCACCCCTCCCACATGACCCATCAGTTCGTCGACCTGGCCCGGTCGCGTGGGGTGCGCTGCCGCCTGCACGACCTTCGGCACCTGATGGTCAGCTACCTAATCTCGCAGGGGGTGGACTGGCGCACCGCGGCCGGCCGGGCCGGGCACGCCAGCCCGCAGATGACGCTTGGGACCTATGCGCACTTCCAGCCGGCTCAGGACCGCGCCGCCGCCGAGCTGCTCGCCGCCCTCTGCGACGACGGGGCGACGGAGGTCGTGCAGTAG
PROTEIN sequence
Length: 386
MIRDRGGYWQVKVYVGLDPLTGRHRFEYDRARTKREAVRVEAALKAKVTEGRQRATAARTVADLVERWYQWRQGVKEISPTTLEGYRRQIDQRILPALGRIPVRRLDVETLDTFYAELRRRGRAGGRPLSASTVRAVHTVLSGSLRQAVAWGWIAHNPARLATPPAVQRSDVTPPPVDQVAGLLATALERNPKLGLFLRLAVVLGARRGELCGLRWQAIDLDRGEVLLERGVVYVTGQPLIDKATKTRSKRRLALDAKTVELLRAHRQRAEQIAGELGFALPASAYVFSREPDGSRPIHPSHMTHQFVDLARSRGVRCRLHDLRHLMVSYLISQGVDWRTAAGRAGHASPQMTLGTYAHFQPAQDRAAAELLAALCDDGATEVVQ*