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PLM1_60_b1_redo_sep16_scaffold_10_4

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 5109..7019

Top 3 Functional Annotations

Value Algorithm Source
Zinc finger SWIM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDN9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 417.0
  • Bit_score: 408
  • Evalue 7.50e-111
Zinc finger SWIM domain protein {ECO:0000313|EMBL:EEF62185.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 417.0
  • Bit_score: 408
  • Evalue 1.10e-110
zinc finger SWIM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 422.0
  • Bit_score: 374
  • Evalue 4.50e-101

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1911
GTGGCGACGCTCACGGCCGAGCAGGTGCTCGCGCTGGCGCCCGACGCCGCGGCCGCCTCGGCGGGCCGGGGCGTGGCCAGCGCCGGCCGCTGGGTCTCGCTCGGCCGGTCCGGCCAGGCGGTGTGGGGCGAGTACCGGGGCAGCGGCAGCCGCCCGTACCAGACCCAGGCCGACCTCGGCGGGCCCGCCTACCGCTGCACCTGCCCGAGCCGCAAGCTTCCCTGCAAGCACGCCCTGGGTCTGCTGCTCCTGCTCGCCGGCGAGCACGCCGCGGTGCCCGAGGCCGGCCCGCCGGGCTGGGTGGCCGAGTGGCTGGCCGCCCGGGCCGAGCGGGCCGCCCGCCGCACCGGCGCCGCGGCCCGGGAGCGGCCCGCCGCCGTGCCCGACCCGGCCGCCCAGGCCAGGCGGGCGGCGGTCCGCGCCGCCAAGGTCGAGGCGGGCGTGGCCGAGCTCGGCCTGCTGCTCCGCGACGTGGTCCGCGGCGGACTGGCCGCGCCCCGGCCCGCCCGCTTCTGGGAGGAGGCCGCCGCCCGCACGGTCGACGCCCAGGCGCCCGGCCTGGCCGGCCGGCTGCGCCGGATCGCCGGCCTGCCCGAGGTCGGGGAGGGCTGGTCGGAGCGGCTGCTCGAGGAGCTGGCCCGCCTCCACCTGCTGGTCGAGGCCCACCGCCGCATCGACCAGCTGCCCCCGGCGACCCGGGCCGACGTCCGCGCCCTGACCGGCTGGCCCCAGCCCAAGGACGAGCTGCTCGCCAGGCCCGGCCTGCGGGACCGCTGGGGGGTGGTCGCGCACCGGGTGGCCGACGAGGACCGCCTGCGCGTGCAGCGGACCTGGCTCTGGGGCGGCCGCAGCGGCCGCCCTGCCCTGCTGCTCGACTTCGCGCCGGCCGGCCAGCCCCTGCCCGCCAGGCCGCCGCCCGGCTCCGGGCTCGACGCCGAGCTGGTCTTCTATCCCGGCAGCACGCCCCTGCGGGCGCTGGTCAAGGCCGAGCACGGCGGCCGCGTCGAGTTCCCGGCCGTGGGGCCCGGGCTCGCCACCGTCGAGGACGCGTACGCGGCGCACGCCGCCGCGCTGGCCGCCAACCCCTGGGCCGGGCCCCTCCCGGTCGTGCTCGACGCGGTGGTCCCGGTCCCGCGGCGCGGCTGGGTGCTGCGCGACCCGGCCGGCGGCTGCCTGCCCCTGAGCCCCTGGTTCGGCGCCGGCTGGCAGCTCGCCGCGCTCGCCGGGGCCGGCCGGTGCGGGTCTTCGGCGAGTGGGACGGCGAGCACCTGCTCCCGCTGTCGGCGGCCGCCGCGGTCGCGCTGCACCGGCGGGCCGGGCGGCGGCCCGCCGTCGACCCGGGCCCGCCGCCCCAGCCCTGCCCGCCGGACGAGGCGCCGGCATGTGGCCGCGTCGCCGCCGGGCACCTCGCCCTGGTGCTCCGCGGCGGCTACGGCGACCTGCTCCCCGAGTGGCTGGACGCCCTGGCCGCCGCCGGCCGGCGCCTGCCCGAGGAGCACCTGCCCGCGCTCCTGGACCTGGCCCGTGACCGGCCCGAGCTGCGCGCCGCCGTGGACCCGGTGCTCGGCCGGCGCGGCCGCTGGCTCGCCGCCCAGAACCCGGCCTGGTCGTGGGCGCTGGACGCCGACCCGGAGGCGGCCTGGCGCTCGGGCGGCCGGGCCGAGCGGCTGGCGCTCCTCGACGCGCTCCGGGCGACCAGCCCGGACGCCGCCCGCGCGCTGGTCGAGGCGACCTGGGACGAGGAGGGCGCCGAGCTGCGCGCGGCCTCCGTGGAGCGGCTCCACGTCGGGCTGGCACCGGCCGACGAGCCGTTCCTCGAGGCGGCTCTGGACGACCGGGCCGCCGGGGTCCGCCGCGCCGCCGCCGCGCTGCTCGCCTGCCTGCCCGGCTCCCGCCTGTGCGCCCGCATGA
PROTEIN sequence
Length: 637
VATLTAEQVLALAPDAAAASAGRGVASAGRWVSLGRSGQAVWGEYRGSGSRPYQTQADLGGPAYRCTCPSRKLPCKHALGLLLLLAGEHAAVPEAGPPGWVAEWLAARAERAARRTGAAARERPAAVPDPAAQARRAAVRAAKVEAGVAELGLLLRDVVRGGLAAPRPARFWEEAAARTVDAQAPGLAGRLRRIAGLPEVGEGWSERLLEELARLHLLVEAHRRIDQLPPATRADVRALTGWPQPKDELLARPGLRDRWGVVAHRVADEDRLRVQRTWLWGGRSGRPALLLDFAPAGQPLPARPPPGSGLDAELVFYPGSTPLRALVKAEHGGRVEFPAVGPGLATVEDAYAAHAAALAANPWAGPLPVVLDAVVPVPRRGWVLRDPAGGCLPLSPWFGAGWQLAALAGAGRCGSSASGTASTCSRCRRPPRSRCTGGPGGGPPSTRARRPSPARRTRRRHVAASPPGTSPWCSAAATATCSPSGWTPWPPPAGACPRSTCPRSWTWPVTGPSCAPPWTRCSAGAAAGSPPRTRPGRGRWTPTRRRPGARAAGPSGWRSSTRSGRPARTPPARWSRRPGTRRAPSCARPPWSGSTSGWHRPTSRSSRRLWTTGPPGSAAPPPRCSPACPAPACAPA*