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PLM1_60_b1_redo_sep16_scaffold_11_14

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(19883..20248)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XUN3_PROPF similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 116.0
  • Bit_score: 162
  • Evalue 1.40e-37
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 116.0
  • Bit_score: 162
  • Evalue 3.90e-38
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 116.0
  • Bit_score: 162
  • Evalue 1.90e-37

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Taxonomy

Propionibacterium propionicum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 366
GTGGCAAGAGTCAAAAGGGCCGTCCACGGCGCCAAGGCCAAGCGGACGACCATGGAGCTGGCCAAGGGCTACCGCGCGAGTCGTGGGCACCACGTGCGGGCGGCCAACGAGCAGATCATGCACTCGCTGCGCTACGCCTACCGCGACCGGCGGGCCCGCAAGGGCGACTTCCGCGCCCTGTGGATCGCCCGGATCAACGCGGCGGCCCGGGCCGAGGGCCTCACCTACAACCGGTTCATCGCCGGCCTGCGGCACGCCGGGGTGGAGGTCGACCGCAAGGTCCTGGCCGACATCGCAGTGACCGACCAGGGCGCCTTCGCCGCCCTCGTCGCCACGGCCAGGGAAGGCCTCGCCAAGAGCAAGTAG
PROTEIN sequence
Length: 122
VARVKRAVHGAKAKRTTMELAKGYRASRGHHVRAANEQIMHSLRYAYRDRRARKGDFRALWIARINAAARAEGLTYNRFIAGLRHAGVEVDRKVLADIAVTDQGAFAALVATAREGLAKSK*