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PLM1_60_b1_redo_sep16_scaffold_11_16

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(20570..21175)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 Tax=Micromonospora sp. ATCC 39149 RepID=C4RHS9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 199.0
  • Bit_score: 217
  • Evalue 7.80e-54
translation initiation factor 3 similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 170.0
  • Bit_score: 217
  • Evalue 2.20e-54
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 170.0
  • Bit_score: 217
  • Evalue 1.10e-53

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Taxonomy

Thermobifida fusca → Thermobifida → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGGGTGCCGACGGAGAGCAGCTCGGCGTCATGGACACCGTCGCCGCCCAGCGCCTGGCAAACGACCTCGACCTCGACCTCGTGGAGGTCGCTCCGCTGGCCCGGCCGCCGGTCTGCAAGCTCATGGACTACTCGAAGTACAAGTACGAGCAGGCCATCAAGGCCAAGGAGGCCCGCCGCAAGCAGAGCCTCGTGGTCCTCAAGGAAATGAAGATGCGGCCCAAGATCGACCCGCACGACTACGCCACCAAGAAGGGCCACGTCGAGCGGTTCCTCAAGCAGGGCCACAAGGTCAAGGTCACGATCATGTTCCGCGGGCGGGAGATGGCCCACACCGAGCTCGGCCGGCGCCTGCTCGAGCGGCTGGCGACCGACATCACCGAGATCGCCCAGGTCGACAGCCCGGCCAGGCAGGACGGCCGCAACATGATCGCCGTGTTCTCGCCCCGCAAGGGCCAGGGCGGGCCCAAGGCGACCCCTACCGGCGACCGGGGCGCGGCAGGGCGCGGCGCGGCCTCTGCCGACCCTGGCGGGTCGCAGCCGGCCCGCTCGAACACCCCTGCCGACCAGGCGGGCGGGCGCGTGGCGCCGGTGCCCGCCTCGTAG
PROTEIN sequence
Length: 202
VGADGEQLGVMDTVAAQRLANDLDLDLVEVAPLARPPVCKLMDYSKYKYEQAIKAKEARRKQSLVVLKEMKMRPKIDPHDYATKKGHVERFLKQGHKVKVTIMFRGREMAHTELGRRLLERLATDITEIAQVDSPARQDGRNMIAVFSPRKGQGGPKATPTGDRGAAGRGAASADPGGSQPARSNTPADQAGGRVAPVPAS*