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PLM4_90_b2_sep16_scaffold_4515_1

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_48_13

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 2 ASCG 7 / 38
Location: comp(2..625)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein bin=GWD2_Nitrospirae-related_57_8 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 204.0
  • Bit_score: 142
  • Evalue 4.30e-31
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 222.0
  • Bit_score: 134
  • Evalue 1.90e-29
Tax=RBG_13_Deltaproteobacteria_47_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 208.0
  • Bit_score: 307
  • Evalue 1.10e-80

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Taxonomy

RBG_13_Deltaproteobacteria_47_9_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGATCCCAATAGGAACGAACCTCAATTTGAAGAATTTTCCATGGGTCACGATCAGCCTTCTTTTTGCCAACTGGATCATTTTCATCCCTTTCAGCAGAAACCTTTACAGCACCGATTTCTGGATAAGCCGGTATTTTTGCACTGTTCCCGGAGATCAATACCCCTGGCAGTTAATCACCTCAATGTTTTTTCACGCGGATCTTCTCCATATTCTTTTCAACTCACTTTTCTTGTTGGTCTTTGGGCCGCCTGTGGAGGATAAACTTGGGTGGAAAGATTATCTCTTCCTCTATTTTATAACCGGCATCTCGGCCAATCTTCTTCATGGAATGATGTACGGACTTTTTCTCCGAGACAAACTTTTCATTCCATCCCTCGGAGCGTCGGGTGCTATTTCCGGGGTGATGGGGGTCTATCTGTACCGGTGCTACTATTCAAAAATAAAACTGGCGATCGACCTCTTCTTACCATTGCGGATCAAACTTCCTGCCTTTATCATCCTCCCCCTCTGGTTCGCCCGGGATTTCATGGGAGGGATTGATTCCATCCGGGGAATTGGCCAGAACGTGGCATTCTGGGCCCATGTGGGAGGGTTTGCAGCTGGGTTCAGCGCCTGCGGATAT
PROTEIN sequence
Length: 208
VIPIGTNLNLKNFPWVTISLLFANWIIFIPFSRNLYSTDFWISRYFCTVPGDQYPWQLITSMFFHADLLHILFNSLFLLVFGPPVEDKLGWKDYLFLYFITGISANLLHGMMYGLFLRDKLFIPSLGASGAISGVMGVYLYRCYYSKIKLAIDLFLPLRIKLPAFIILPLWFARDFMGGIDSIRGIGQNVAFWAHVGGFAAGFSACGY