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PLM4_90_b2_sep16_scaffold_851_12

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(12058..12603)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface-associated sigma-54 modulation protein RaiA Tax=Geobacter sulfurreducens RepID=D7AJX0_GEOSK similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 181.0
  • Bit_score: 146
  • Evalue 2.00e-32
raiA; ribosomal subunit interface-associated sigma-54 modulation protein RaiA similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 181.0
  • Bit_score: 146
  • Evalue 5.60e-33
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 181.0
  • Bit_score: 277
  • Evalue 8.00e-72

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Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCAGGTTTCGGTGACGTTCAGACATATGGAGACCGACGAAGGGGTCAAAGCCTATGTAAAAGAAAAGGTACAGAAACTACAAAAATATGTTGAGAATCCAAGGGAGGTCCATGTCGTTCTATCGGTAGAAAAATTTCGGCATATCGCGGAAATCACCATTGTCGGAAATGGAGGGACTTTCAATAGCCAGGGAAGGGACAATGATCTTTATGCTGCCATTGATCAGACAGTGGAGAAGATGGAGCGCCAGATTCGTGAACGGAGAGGAAAGGTAAGGCGAAAGAGGGTGAGTCCCTCTCCTTCAAAGATCCCTCTCTCAAGGGGTGAAAAGATTAACGAAAGGGAAGAAGAAGGAGACACTCCTTTCCGCATTCAGAGGAAGCGTACCATTGCCAAACCCATGTCTCTTGATGAAGCAGTCTCTCAATTGGCTCTCTCAAAAGAGGATTTTTTAGTATTTATCAATTCGGATTCTGTACAGATGAACGTCGTCTGTCGCTCTAAGGACGGGAGTTACGAATGGGTGGAGCCCCATCCCAAATAG
PROTEIN sequence
Length: 182
MQVSVTFRHMETDEGVKAYVKEKVQKLQKYVENPREVHVVLSVEKFRHIAEITIVGNGGTFNSQGRDNDLYAAIDQTVEKMERQIRERRGKVRRKRVSPSPSKIPLSRGEKINEREEEGDTPFRIQRKRTIAKPMSLDEAVSQLALSKEDFLVFINSDSVQMNVVCRSKDGSYEWVEPHPK*