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PLM4_5_b1_sep16_scaffold_385_3

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1804..3021)

Top 3 Functional Annotations

Value Algorithm Source
ABC efflux pump, inner membrane subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC3_KORVE bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 405.0
  • Bit_score: 424
  • Evalue 6.50e-116
antimicrobial peptide ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 404.0
  • Bit_score: 333
  • Evalue 5.50e-89
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 405.0
  • Bit_score: 424
  • Evalue 9.10e-116

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1218
ATGATCCTGCGCGAGAGTGTCGGCATCGCCCTCGGCGCGATCCGCGCCAACAAACTGCGTTCGTTCCTGACCCTGCTCGGCACCATCATCGGGGTCGCCGCGGTGATCGCGGTGCTGTCGTTCGTCGAGGGGCTCAACCGCTATGTCTCCGAGAAGCTGCTGGCGGCCGGCTCGAACGTGTTCTGGGTCGACAAGTACGGGATCATCACCAGCCAGGAGGCGTGGGAGGACGCGATGAAGCGTCGCGACATCACGCCGGAAGACGCCGACGTGTTGCGCGAGGGCGTTCCGCACGCGACGATGGTGGTGGCGATGGCGAGCGGGAACACCAACGTCCGCTTCGAGCAGAAGATCGTCCGCAGCATCGAGCTGCGCGGCCGGAGCGCCGGGTTCGAATCGGTCGACGACATCACGGTGGTCGCCGGCCGCGCGTTCAACGAGACCGACGACCTGCGGCGCCGGCTGGTGTGCGTGATCGCGCCCGAGGTCGCCGACGAGCTGTTCGACCGCAAAGATCCGATCGGGCAGACGGTCCGGGTCGGGTCCCAGAGCTACGAGGTGCTCGGCATGACCGAGCGCAAGGGCAGCGTGCTGGGCCAGAACCAGGACCGCTACGTGTGGGTTCCGATCCGCACCTTCCTCAAGCACCACACCGACCGCCGCAACGTCGACCTGGCGATCAAGAGCGAGAGCCAGGCGGCGCTGCCGCTCGCCCAGCAGGAGGCGCGCAACATTCTGCGTGCCCGCCGGCATCTGCGGCCCGGCCAGGCGGACGATTTCTCGATCACCACGTCGGACAACGTGATGGACCTGTACCGGAACCTGACCGGCGGCATCTTCGTGGTCACGATCGGCGTGGCCTCGATCGCGCTGCTGGTCGGCGGGATCGTGATCATGAACATCATGCTGGTGTCGGTGACCGAGCGGACCCGCGAGATCGGCATCCGCAAGGCGCTCGGCGCCCGGCGGCGCGACGTGCTGAGCCAGTTCCTGGTCGAGTCGACCACGCTGTCACTGGCGGGCGGGCTGATCGGCATCCTGCTCGGGACCGGGATCGCGCTGCTGGTGGGGGCGATCAGTCCGCTGCCCGCTGCCGTCAGCATGCCCGCGGTCATCATGGGCATCGCCATGTCGTCGATCATCGGAATCTTCTTCGGCTCGTATCCGGCGGCGCGCGCGGCGCGCCTCGACCCGATCGAAGCCCTGCGGTACGAGTAG
PROTEIN sequence
Length: 406
MILRESVGIALGAIRANKLRSFLTLLGTIIGVAAVIAVLSFVEGLNRYVSEKLLAAGSNVFWVDKYGIITSQEAWEDAMKRRDITPEDADVLREGVPHATMVVAMASGNTNVRFEQKIVRSIELRGRSAGFESVDDITVVAGRAFNETDDLRRRLVCVIAPEVADELFDRKDPIGQTVRVGSQSYEVLGMTERKGSVLGQNQDRYVWVPIRTFLKHHTDRRNVDLAIKSESQAALPLAQQEARNILRARRHLRPGQADDFSITTSDNVMDLYRNLTGGIFVVTIGVASIALLVGGIVIMNIMLVSVTERTREIGIRKALGARRRDVLSQFLVESTTLSLAGGLIGILLGTGIALLVGAISPLPAAVSMPAVIMGIAMSSIIGIFFGSYPAARAARLDPIEALRYE*