ggKbase home page

PLM4_5_b1_sep16_scaffold_597_16

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(19523..20230)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 235.0
  • Bit_score: 180
  • Evalue 4.60e-43
tRNA pseudouridine synthase A Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKF3_DESK7 bin=16ft_combo_ws3_JS1 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 237.0
  • Bit_score: 250
  • Evalue 9.70e-64
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 237.0
  • Bit_score: 250
  • Evalue 1.40e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 708
TACGACGGAACCGACTTCCATGGCTGGCAGCGGCAGCCCCACCTGCGCACCGCACAGGGCGAGCTCGAGGCGGGGCTCGCCACCGTGCTGGGCGAGACGATCGTCACCACCGCGGCGGGGCGCACGGACGCCGGCGTCCACGCGCGGGGCCAGGTCGTGAGCTTCCGGACCGGCACCCGGCTGCCGGTCACCGCGCTGGTCCCGCTGCTGCGACGGACGCTGCCCGACGACCTGAGCGCGGTGCGGGCCGAGACCTGTGCCGACGACTTCGACGCGCGACGCTCCGCGCGCGCCCGCCACTACGCCTACCGGCTGCTCGATCGCGACGACCTGCTGTGGCGGCGCTACGCGTGGCATCCGCCCGGGGCAATCGACGGCGCCGCACTTCGCGCGGCGACCGAGACGCTGCTCGGGGAGCACGACTTCACCGCGCTCCGTTCGACCGGCAGCTCGCCGAGCTCTCCGACCTGCCGCGTGATGCGCGCCGAGTGGACCCGCTGGGACGCGGGCTGGCGGCTCGACATCGTGGCCGACCATTTTCTCTATCACATGGTGCGCAACGTGGTCGGGACCGCGCTCGCGGTCGCGCGCACGGCCGACCCGGCCGCCACCATGCAAGCGGTGATCGCTTCGCGCGACCGCACCGCCGCCGGACCCACCATTCCGCCCCAGGGCCTGAGCCTCGAGGAGGTCACGTACACCTCATGA
PROTEIN sequence
Length: 236
YDGTDFHGWQRQPHLRTAQGELEAGLATVLGETIVTTAAGRTDAGVHARGQVVSFRTGTRLPVTALVPLLRRTLPDDLSAVRAETCADDFDARRSARARHYAYRLLDRDDLLWRRYAWHPPGAIDGAALRAATETLLGEHDFTALRSTGSSPSSPTCRVMRAEWTRWDAGWRLDIVADHFLYHMVRNVVGTALAVARTADPAATMQAVIASRDRTAAGPTIPPQGLSLEEVTYTS*