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PLM4_5_b1_sep16_scaffold_1335_24

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(24897..25604)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 230.0
  • Bit_score: 407
  • Evalue 8.10e-111
drrA; response regulator DrrA similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 227.0
  • Bit_score: 208
  • Evalue 1.20e-51
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 230.0
  • Bit_score: 407
  • Evalue 1.10e-110

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 708
ATGACGAGGGTCTTGATCGTCGAGGATGAGGAAGGACTGCTCGAGGGCCTCGAGCACAACTTCAAATATGAAGGGTTCGATGTGATGACCGCGACCAACGGCCAGGAGGGGCTCAAGCTCGCCCTCAAGCAGAAGCCGGACATCGTGGTCCTGGACATCATGCTGCCCGAGAAGGACGGCTTCACCGTCCTGCGCGAGCTGCGCCAGCGTCACCGCGACATGCCGGTGCTGGTGATCACCGCGCGCAACTTCGAAGCCGACGTGCTCAAGGGCTTCGAGCTCGGCGCGGACGACTACCTGACCAAGCCGTTCGGCGTGAAGGAGCTGCTGGCACGGGTCAAGCGCCTGGTCCAGCGGGGTCCCAACGCGGGACGCGCTCCGATGACCACCTACACGTTCGGCGACGTCGAAGTGCGATTCGAGCCGCGCGAGGTGCTCAAGATCGGCAAGCAGGTGGCGCTGTCGTACAAGGAATTCGAGCTGCTCAAGTACCTGGTCGAGCATCGCGGACGCACCGTGTCGCGCGAGGAGCTGCTCGAGGAAATCTGGGGCGTCGACGAGGATCTCGGCGTCACCACCCGCACGGTCGACACGCACGTCTCGAACCTGCGCTCCAAGCTGGGGTCCGGATTCGAGCAGCCGTTCATCGTTGCGGTGCACAAGGTGGGCTACAAGTTCGTGGAGCCCGCCGGTGCGGTCATGAGTTGA
PROTEIN sequence
Length: 236
MTRVLIVEDEEGLLEGLEHNFKYEGFDVMTATNGQEGLKLALKQKPDIVVLDIMLPEKDGFTVLRELRQRHRDMPVLVITARNFEADVLKGFELGADDYLTKPFGVKELLARVKRLVQRGPNAGRAPMTTYTFGDVEVRFEPREVLKIGKQVALSYKEFELLKYLVEHRGRTVSREELLEEIWGVDEDLGVTTRTVDTHVSNLRSKLGSGFEQPFIVAVHKVGYKFVEPAGAVMS*