ggKbase home page

PLM4_5_b1_sep16_scaffold_841_9

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(8195..9202)

Top 3 Functional Annotations

Value Algorithm Source
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21) similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 322.0
  • Bit_score: 273
  • Evalue 7.40e-71
Phytoene/squalene synthetase Tax=uncultured gamma proteobacterium HF0770_07M15 RepID=E7C6K0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 322.0
  • Bit_score: 335
  • Evalue 4.30e-89
Phytoene/squalene synthetase {ECO:0000313|EMBL:ADI23074.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium HF0770_07M15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 322.0
  • Bit_score: 335
  • Evalue 6.00e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured gamma proteobacterium HF0770_07M15 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGGCGACTGACCTTCCCAATCTTGATCCGCTTTGGCCGGTGCTGCGGGATACCTCACGGTCGTTCTACTGGACGCTCCGTGTGTTACCGACAACCGTGCGCCCGCAAATCGGCCTGGCCTACTTGCTGGCGCGGGCGACCGATACCATCGCGGACACGGGCCTGGTGCCTGTGGCAAAGCGGTTGGAGTCGTTGCGCCTATTGCGCGAGCGCATCCAGGGCCGCAGCCGGGCGGCGCTCGATTTTGAAGCCCTGACTCAACATCAGGCTTCCGCTGCCGAGGGATTGCTGCTGACCAAAGCCGAAACTCTGATTGCTTTGCTGGAAGCGTTGCCTGAGCTGGACCGCACGCTGGTGCGGGCGGTCCTCGAAACCATTGTCAGCGGCCAGGAACTGGATCTGCAGCGATTTGACGGCGCCTCGACATCTGCGATCAAGGCTCTGTTAACCGAAGCAGATCTCGACGATTACACCTATCGCGTTGCCGGCTGCGTCGGGGAGTTCTGGACAAAGATTTGCCGCGCGCACGTGTTTCCCGCTGCATCGCTCGATGAAGCGATTCTCCTGGAACAAGGCATCCGGTTCGGAAAAGGCCTGCAGTTGGTGAACATTCTGCGCGACCTGCCGGCGGACCTCCGCCAGGGCCGTTGCTACCTTCCGCTTACCGGACTAAGCGAGGCGGGGCTAGCCCCATCCGACCTATTGCGACCCGAGAATATCGACCGTGTGCGCCCGAGTTTTGATCGGTGGCTTAAACGCGCCGAGGACCATTTGCACGCCGGCTGGGCCTACACAAATTCACTGCCGCGGAATTGCCGCCGGGTCCGCCTGGCCTGCTCCTGGCCGGTGCTGATCGGCCAGCGGACCCTGAAGCTACTGCGCACGCAAAACGTTCTGGACGGCAGCCGGCGAATCAAGATCACACGGGGGGAAGTCCGGGCGATTTTCCTGCGCACGGTCCTACTGCTTCCCTTCCGTTCCCATTGGCGGGGAATGGGTGATTCTTAG
PROTEIN sequence
Length: 336
MATDLPNLDPLWPVLRDTSRSFYWTLRVLPTTVRPQIGLAYLLARATDTIADTGLVPVAKRLESLRLLRERIQGRSRAALDFEALTQHQASAAEGLLLTKAETLIALLEALPELDRTLVRAVLETIVSGQELDLQRFDGASTSAIKALLTEADLDDYTYRVAGCVGEFWTKICRAHVFPAASLDEAILLEQGIRFGKGLQLVNILRDLPADLRQGRCYLPLTGLSEAGLAPSDLLRPENIDRVRPSFDRWLKRAEDHLHAGWAYTNSLPRNCRRVRLACSWPVLIGQRTLKLLRTQNVLDGSRRIKITRGEVRAIFLRTVLLLPFRSHWRGMGDS*