ggKbase home page

PLM4_5_b1_sep16_scaffold_3928_2

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(333..716)

Top 3 Functional Annotations

Value Algorithm Source
response regulator receiver protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 121.0
  • Bit_score: 124
  • Evalue 4.30e-26
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 122.0
  • Bit_score: 120
  • Evalue 2.30e-25
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 124.0
  • Bit_score: 131
  • Evalue 6.50e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP3X_51_18 → OP3X → Bacteria

Sequences

DNA sequence
Length: 384
ATGGATAACGACAAAAAGAGAATCATGGTGGTGGACGATGAGCCGAGCATCACCCGGCTGCTTAAGCTTAACCTGGAGCAAACCGGCCGCTACGAGGTCTGTGGCATCAACAACGCCGCCCTCGCCTTGTCCGCCGCCCGGGAATTCCAGCCGGACCTGATACTGCTGGACGTGATGATGCCGCATGTGAATGGCGACGAACTGGCCAATCAGATCCATGCCAGCCCGCGGCTTAAGAACACACCCATCGTTTACCTGACGGCCCTGGCCACGCCGGGTGAGGTTTCCTCACACGGAGGCCTCATCGGCGGCTTGCCATTTCTGGCCAAGCCCGTCGACCTGCCGGAAGTGATGGGATGCATCGAACGCCACCTCGGTGCCTGA
PROTEIN sequence
Length: 128
MDNDKKRIMVVDDEPSITRLLKLNLEQTGRYEVCGINNAALALSAAREFQPDLILLDVMMPHVNGDELANQIHASPRLKNTPIVYLTALATPGEVSSHGGLIGGLPFLAKPVDLPEVMGCIERHLGA*