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PLM4_5_b1_sep16_scaffold_3946_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(3049..5559)

Top 3 Functional Annotations

Value Algorithm Source
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 854.0
  • Bit_score: 1245
  • Evalue 0.0
DNA gyrase subunit B Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000364A3BD similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 843.0
  • Bit_score: 1271
  • Evalue 0.0
gyrB; DNA gyrase subunit B similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 826.0
  • Bit_score: 1044
  • Evalue 0.0

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2511
ATGTCTGAAAACAACGTTTTGGAAGCAGATCAAAATATCAATCCGGTGGTTCCGGTAGAGAAGTACGACGCGTCGAAAATCGACAAGTTGGAGGGCCTCGAAGCCGTCCGCAAACGCCCGGGAATGTATATCGGCGACCCTGACGAACGCGGCCTGCACCATTGCGTATTTGAGGTCCTCGATAACTCCATTGACGAGCACCTAGCCGGATACTGCAGCAAGATCGAAGTCACCGTCCATGTCGACGGCTCCGTTTCCATCCGCGACAACGGCCGCGGCATTCCCGTCGACATCCATCCCAAATTCAACATCCCGGCGATTGAACTCGTGCTCACCAACCTGCACGCCGGCGGCAAATTCGGGCAGGGCGCCTATAAGTACTCCGGCGGATTGCATGGTGTCGGCGCCAAGTGCGTAAACGCCCTCTCCGACTGGTTCAAAGTCGAAGTTTCCCGCGAGGGCATGATCCACTCCATGGAATTCGCCCGCGGAATCACCACCGAGAAACTCCGTGTCATTGGCAAAGCCCGCGGCACCGGCACCCTGATCACCTTCAAGCCGGACCCCACGATCTTCACCATCACCACCGAATTCAAATTTGAGATCCTGGCCAATCGCCTGCGCGAGCTGGCCTTCCTGAATCCCGGCGTCGAAATCGTCCTGGCCGACGAGCGCACCGAAAAGAACGAGACCTTCCTCTATAAAGACGGCATCGAGGAATTCGTCAAACAGCTCGGGCGCAACAAGCAAATCCTCCATCCCAAGCCCATTATCATCAACCGGCAAAAGGAGGAAGTCTTCGTCGATTGCGTCATGCAATACACGGACAGCTACAACGAGCAGATCCTCTGCTTTGCCAACTCGATCCCCAACCCGGACGGCGGCACCCACCTCACCGGCTTCCGTTCCGCCCTGACGCGCGCCATCAATCAATACGCCAAGCAAAACGAGCTGCTGAAAGAAAAGGACCCGGCAATCTCCGGCGACGACGTCCGCGAAGGCCTCGTCTGCGTCCTGAGCGTCAAACTCCCCAACCCCCGCTTCGAGTCCCAGACCAAAGTCAAACTGGTCAACACCGAAATCGACGGCATCGTCTCCTCCGTCGTTTACGACGCCTTGATGAACTGCTTCGACTCCACGCCGGCGCTGGCGAAGAGAGTCATCGAGAAAGCCCTTCTGGCCGCCCGCGCCAGAGAAGCCGCCAGAAAAGCCCGCGAAACCGTCCGCAAAGGCGCCCTGACCGGCGGTGGCCTCCCCGGTAAACTGGCCGATTGTTCCGACAGAGATCCTTCCAACACAGAGCTTTACATCGTAGAAGGTGATTCCGCAGGCGGCTCCGCCAAACAAGGCCGGGACCGCCGATTCCAGGCGATCCTTCCCATCCGCGGCAAACTGATCAACGTAGAAAAGGCCCGCCTGGACAAGGTGCTTCAAAATAACGAAATCCGCACCATGATCACGGCGGTAGGCACCGGCATCGGCGACGGCGATGGCGAAGGCGCGTTCAACCTCGAGAAACTCCGCTACCACAAGATCATCATCATGACCGATGCCGATGTGGACGGCTCGCACATCCGCACCCTGCTCCTGACCTTCTTCTATCGCCAGATGCCGCAATTGGTAAAGCAGGGCTTCATGTACATCGCCCAGCCGCCGCTCTACCAGATCGCGCGCAAGAAGCGCGTCGAGTACGTCGATGACGATGCGGAACTGAACCGCATCCTCATCCAGCTCGGCACCGACGAAGTCCGCCTCAGGAACTTGCAGGACCAGCGGGAGCTCTCAGAAAAACAGCTCAACGAAGTGGTGGAACTGCTGGAAGCGCTCGACAAATACGCAATCGGCCTGCGCCGCAAGGGCGGCGATTTTGCGACCTACCTTGATCAACGTGATCCGGTTGCGCACAAGCTTCCGGAGCACCTCGTAAAGATCCGCGCCGGGAACGAAGAAACCGTGCAATATTTTCGCAATCGCGAGGAATTGGCAAAATTCGCCGCCGAGAATCCGGACCTGGACGTAGGGCTTTCCGGAGAAGCGGAAAGCGATACCAGCCTGATCGAAAAATCCAAAAACAGCACCACTCGCCGGGCGCGCCACGAGGAGCTATACGAAAGCAACGCGATCAAGACCCTGCTGGAAACCCTCGTGCAGAAGGGCTTTGGCATCGACCATTATTCCGCCCAGGATAAGCCGCTGTTCGAGCTGATCGAAGGCGAAGGCGACCGCCAACAGGTGAAGCCGCTCTTCTCGATCCCGGAGATTCTGTCGAGCATCAAGGAAGTGGGGCGCCGCGGGCTGCAGATCAAGCGGTTCAAAGGTCTGGGTGAAATGAACCCGGAAGAGCTTTTTGAAACCACGATGAACCCCGCCAACCGCAAGCTCCTGCGCATCGATGTCACCGATGCCATCGAGGCGGAAGAGATGTTCACCAAGCTGATGGGCGAAGAAGTGGAGCCGCGCCGCCAGTTTATCGAGGACAACGCGCTGAATGTGCGCAACCTCGATGTTTGA
PROTEIN sequence
Length: 837
MSENNVLEADQNINPVVPVEKYDASKIDKLEGLEAVRKRPGMYIGDPDERGLHHCVFEVLDNSIDEHLAGYCSKIEVTVHVDGSVSIRDNGRGIPVDIHPKFNIPAIELVLTNLHAGGKFGQGAYKYSGGLHGVGAKCVNALSDWFKVEVSREGMIHSMEFARGITTEKLRVIGKARGTGTLITFKPDPTIFTITTEFKFEILANRLRELAFLNPGVEIVLADERTEKNETFLYKDGIEEFVKQLGRNKQILHPKPIIINRQKEEVFVDCVMQYTDSYNEQILCFANSIPNPDGGTHLTGFRSALTRAINQYAKQNELLKEKDPAISGDDVREGLVCVLSVKLPNPRFESQTKVKLVNTEIDGIVSSVVYDALMNCFDSTPALAKRVIEKALLAARAREAARKARETVRKGALTGGGLPGKLADCSDRDPSNTELYIVEGDSAGGSAKQGRDRRFQAILPIRGKLINVEKARLDKVLQNNEIRTMITAVGTGIGDGDGEGAFNLEKLRYHKIIIMTDADVDGSHIRTLLLTFFYRQMPQLVKQGFMYIAQPPLYQIARKKRVEYVDDDAELNRILIQLGTDEVRLRNLQDQRELSEKQLNEVVELLEALDKYAIGLRRKGGDFATYLDQRDPVAHKLPEHLVKIRAGNEETVQYFRNREELAKFAAENPDLDVGLSGEAESDTSLIEKSKNSTTRRARHEELYESNAIKTLLETLVQKGFGIDHYSAQDKPLFELIEGEGDRQQVKPLFSIPEILSSIKEVGRRGLQIKRFKGLGEMNPEELFETTMNPANRKLLRIDVTDAIEAEEMFTKLMGEEVEPRRQFIEDNALNVRNLDV*