ggKbase home page

PLM4_5_b1_sep16_scaffold_7694_12

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 12978..15356

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein Tax=Pedosphaera parvula Ellin514 RepID=B9XA99_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 701.0
  • Bit_score: 441
  • Evalue 1.30e-120
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF63440.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 701.0
  • Bit_score: 441
  • Evalue 1.80e-120
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.4
  • Coverage: 764.0
  • Bit_score: 347
  • Evalue 7.30e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2379
ATGAACAAAGCTTCTCAAGTCGGCAAAAAGGTTGCGCTGTGCCTGGTCCTGGCCGGGCTGACGCTGGCCTCCTTTCTGCCCGCCCTGCAGAACAAGTTCGTCAATATCGACGACCAACTTTATGTCACCGCGAACCCAATCGTGAAATCCGGGCTCAGCGCGGAAAGCGTGCAGTGGGCGTTCACGACGCGCGAAGGCGGTAACTGGCATCCGCTCACCTGGCTTTCCCACCTGCTGGATGTGCAGTTCTTCGGATTGAATCCCGCCGGTCATCATGGCACGAGTGTCGCTCTCCACGTCGTGAACGTGCTGTTGCTGTTCTGGCTGCTCACGCTCTTGACCGGGAAATTCTGGCCGAGCTGTGTCGTGGCCGCCCTCTTCGCTGTGCACCCGTTGCGCGTGGAATCGGTGGCCTGGGTTTCCGAGCGGAAAGACGTGCTCAGCGGGTTATGGTTCATGCTGACCCTGCTGGCATACGCAAAATACGCGGGTTGGGGTGGGGGGGCAGGGGTCGGTGATCAGGGTCCAGGGACCAGCGGTCAGTCGCCGCTGGTCACCAATGGAAAGGCTAAGGGCGCTGGTTTCGATTCGGGAATTGTCCAACTCAATGCGCGGACCCGGGCATACGGATATTACGCGCTTGCGCTGGTGACCTTCGCCCTGGGACTAATGAGCAAACCGATGCTGGTAACAGTTCCCTGCGTGTTGTTGTTGTTGGACGTCTGGCCGCTGCAACGATTCAAAGCCTGCCCGTCGCTCGCCATTGGGGCGAAACGGATGGTCATCGAGAAGATCCCTTTCTTCCTGCTCACTCTGGTCGCCTGCATCGTCACGTTCCGTGCCCAGGACGCCGCCAGGGCCGTGATGAGCACTGCCGATCTCTCCGTTCCTAACCGTGTGGGGAATGCCCTCTGCGCCTACGCCAAGTACCTCTGGAAGACCATTCTGCCGGTGGATCTCGCCCCCTTCTATCCCATGCCGGCCTCGCACGACTTGTTGCCGGGCATTCTTTCCGGCGCAGCGATCGTCGTCGTCACGGCTCTCGCGTTGCGGATGTTCCGGCGTTTGCCGGCGGTTTCAATGGGCTGGCTATGGTTTCTTGGGATGCTGGTTCCGGTGATCGGGTTCGTCCAGGTCGGCATGCAGTCCATGGCGGATCGCTACACTTATCTTCCTTCGATTGGGCTGTTCATTGCTGTCGTCTTTTCCGCCGCCGAATTGGCGGTGAACCTGCCCCGGCAGCGGATACTGATCGGCATCGCCAGTGTGTGCGTGGCGGTTTGCGCGGTCCTCACTTCCCAGCAGACGCGCCTGTGGAAGAACTCTAAGATCCTGTTCAGGCATACGCTGGAAGTGGACCCAAACAACCCCGTGGCTCTGCATTCCTATGGCAACGTCATGGTCGATGAGCGCAAGATCCCGGAAGCCGAGTTCTATTTCGAAAAAGCGGTTCAACTCTGCCCCAACTACGCCGAGGCGATGACCGATCTCGGCCTGGCTGTGGTAATGAACGGCAGGGTGGATGAGGGTATTCAGCACTATCGCCGTTCCATCGGGTTGAAGCGCGATCAGGAGACCGCGCACTTTAATCTCGCGCGAGCCCTGGCCATGAAGGGGCAGTTTGCGGACGCCGAAGTGGCCTACCGGGAGGCGTTGGGCATTAAGCCGGACAGCAAGGATTCCCTGCTGGGGTTGGCCGAGTCTCTGGTGGCACAAGGCAAGACTCCCGAAGCCGCCGCATGCCTCCAAAAGATTCTCGAGGTTGACCCGCGAAACCGGGTCGCTCTGATCGCCAAGGGCGAGTTGCTGGGGCGCGATGGGAACTTTGCCGCCGCGGACGCACTGTTCCGCCAGGCGATTGAAGGCGCTCCCGCCGATCCCGAAACACGCCGGCGGTATGGCCTACTCCTGGCGCACGAAGGAAAGAACGCCGAATCACTGGTCCAACTCGCCGAACGCCTGCGGCTGCAACCCGATGCGGAATCCCACTTCAATATCGGCGTCGTCCACGAAGGTCTTCGTGATTATGCCGCTGCCGCCGCTGCCTACCGGGAGTGTCTGCGGTTGGTCCCGGATTCGCCACCCGCCTTGAACAATCTGGCGTGGCTGCTCGCCACCTGCCCGGAGCCGTCGGTCCGGAACGGCGCCGACGCTGTCGCCTATGGCGAAAAACTTTGCCGCTTGACCGGGTTCGGCGAAGCGATGTTTCTCGGCACGCTAGCGGCCGCCTACGCCGAGACGGGCAGGTTTCCGGAGGCTGTGAAGGCCGGGGAACAGGCGCGGTCCCTCGCCGAAAAGGCCGGCAACAAATCCCTGGCGGATCGTAACTCCGAGTTGCTGGAACTCTATCGGCAGGGTAAACCCGTCCGTACGCCGTAG
PROTEIN sequence
Length: 793
MNKASQVGKKVALCLVLAGLTLASFLPALQNKFVNIDDQLYVTANPIVKSGLSAESVQWAFTTREGGNWHPLTWLSHLLDVQFFGLNPAGHHGTSVALHVVNVLLLFWLLTLLTGKFWPSCVVAALFAVHPLRVESVAWVSERKDVLSGLWFMLTLLAYAKYAGWGGGAGVGDQGPGTSGQSPLVTNGKAKGAGFDSGIVQLNARTRAYGYYALALVTFALGLMSKPMLVTVPCVLLLLDVWPLQRFKACPSLAIGAKRMVIEKIPFFLLTLVACIVTFRAQDAARAVMSTADLSVPNRVGNALCAYAKYLWKTILPVDLAPFYPMPASHDLLPGILSGAAIVVVTALALRMFRRLPAVSMGWLWFLGMLVPVIGFVQVGMQSMADRYTYLPSIGLFIAVVFSAAELAVNLPRQRILIGIASVCVAVCAVLTSQQTRLWKNSKILFRHTLEVDPNNPVALHSYGNVMVDERKIPEAEFYFEKAVQLCPNYAEAMTDLGLAVVMNGRVDEGIQHYRRSIGLKRDQETAHFNLARALAMKGQFADAEVAYREALGIKPDSKDSLLGLAESLVAQGKTPEAAACLQKILEVDPRNRVALIAKGELLGRDGNFAAADALFRQAIEGAPADPETRRRYGLLLAHEGKNAESLVQLAERLRLQPDAESHFNIGVVHEGLRDYAAAAAAYRECLRLVPDSPPALNNLAWLLATCPEPSVRNGADAVAYGEKLCRLTGFGEAMFLGTLAAAYAETGRFPEAVKAGEQARSLAEKAGNKSLADRNSELLELYRQGKPVRTP*