ggKbase home page

PLM4_5_b1_sep16_scaffold_8018_6

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 1881..3080

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CXT3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 32.2
  • Coverage: 425.0
  • Bit_score: 183
  • Evalue 3.20e-43
Integrase family protein {ECO:0000313|EMBL:EDY21081.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.2
  • Coverage: 425.0
  • Bit_score: 183
  • Evalue 4.50e-43
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 29.3
  • Coverage: 164.0
  • Bit_score: 65
  • Evalue 2.80e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAAATACGTAAAGCGCGGTTCGGTCACCATTCCGGTCTACCACACGCCCCGCAGCAATGGCGAGGGGTGGACGGTTGCCTACCGTGAGCCGTCCGGCCAGCGGCGGCGCATCTTCCGATCATCCCTCGCAGCGGCGAAGCTGGAGGCCGAGGCTGTAGCAACGCGCCTGGCTAACGTGCAGGACGTCCTGGTCGGCCCCGAGGCCCAGGAAGCCAGCCAGGCGCGTCAACTAGCCCAGGCTGCCGGCTGCACGCTCCTGGGGGCGGTCCAGGGCTTCTGTAGCATCAAAGCCCGGCTGAATGGCAAAGGCTCCCCGGATGCAGCCGTAGACTACTTTCTCAGCCGTGCGACGGAAGTCCTCCCAGACGTCTCGATTTCGCAAATCCGCGACGAGTTCCTCATCCAGCAGAAGCAGGACGGCATCAGCCAGCCCTACCTGGACGAGCTTGAGGGCCGGCTGAAGCCGTTCTGTGAAAGCCTCTCCTGCCCGCCGGCTCTGCTGACGGCGAAGGTGATCGAGGAATGGCTGCGGGCGCAACAAAAGGCACGCGGCTGGTCGGGCCGGACCCGCAACCACTGCCGGGCCGCAATCTCAAACCTGCTGAATTTTGCCAGGCGCAAGGGCTACCTGCCGCGCACCTGGGCGGAAATGGGTTTTGTCAGCAAGGCGACCGAGGAGGATGAGGAGATAGGGATTTACACGCCAGCGGAGTTGTTGAGAATCCTGGAGCGGGTTTTCAACACCGACCCCAACAAGGACCTTCAGCCCTTTGTGGTGCTCGGAGCCTTCACGGGCGCGCGACCGAGCGAGATTCTGCGGCTCCGCTGGGAAGATTTTCACTGGGAGAGCAGCGAGCTATTCATCGGCATCGGCAAGGTGCGGAAGGCCGGGCACCGCATCGTCCCGCTCCTGCCGGCCTGCGTCGCCTGGCTGAACAAGCTTCGCAAGACCTCGGGGCGAGTGGCGACGCTGGAATTTTTCTCTAGCCCCCTGGTGGGTCTTGTGCGGAGCGCCGGGGTTAAGGGCATCCGCGACGGGCTGCGGCATAGCTTCATCAGCTACCGTCGAGCCGTGACAAAAGACCTGGCGCTGGTAAGTGGCGAAGTGGGGACGGACACGGCGACGCTGACCCGTCGCTACTGCCGGCCCGTGAAGCTGGCGGAGGCAGAGGCGTGGTTTGCGGCCCGGCCCGGTTGA
PROTEIN sequence
Length: 400
MKYVKRGSVTIPVYHTPRSNGEGWTVAYREPSGQRRRIFRSSLAAAKLEAEAVATRLANVQDVLVGPEAQEASQARQLAQAAGCTLLGAVQGFCSIKARLNGKGSPDAAVDYFLSRATEVLPDVSISQIRDEFLIQQKQDGISQPYLDELEGRLKPFCESLSCPPALLTAKVIEEWLRAQQKARGWSGRTRNHCRAAISNLLNFARRKGYLPRTWAEMGFVSKATEEDEEIGIYTPAELLRILERVFNTDPNKDLQPFVVLGAFTGARPSEILRLRWEDFHWESSELFIGIGKVRKAGHRIVPLLPACVAWLNKLRKTSGRVATLEFFSSPLVGLVRSAGVKGIRDGLRHSFISYRRAVTKDLALVSGEVGTDTATLTRRYCRPVKLAEAEAWFAARPG*