ggKbase home page

PLM4_5_b1_sep16_scaffold_9663_2

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 618..2666

Top 3 Functional Annotations

Value Algorithm Source
Hemolysin-type calcium-binding region Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VK53_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 32.6
  • Coverage: 604.0
  • Bit_score: 214
  • Evalue 2.90e-52
Hemolysin-type calcium-binding region similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 604.0
  • Bit_score: 214
  • Evalue 8.30e-53
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:AFZ07590.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.6
  • Coverage: 604.0
  • Bit_score: 214
  • Evalue 4.10e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oscillatoria nigro-viridis → Oscillatoria → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 2049
GTGGACACGACTCCGCCGGTAGTCACCTGCGCCTCGAACCAGGTGATTGAATACGGCACCGCCTGGAATTTCGTCGCCCCGACCGCAATCGACATCGCGGACGGCCGGGACCTGACCTATGCGGTGATCGGCACCACGACCAACGGCAACTGTGGCAAAACTTTCGTCGCCACCCGGACCTGGTCAGTGACGGATGCTTGCGGCAATTCGAATACCTGTTCACAAGTGGTGGCCGTGGTGGACACGACCCCGCCGGCGATCACGTGCGCTTCGAACCTGGTGGTTGAGTGCGGCGACGCCTGGACGTTCACCCCTCCGACAGCCGTGGACATCGCCGATGGCGACAGTCTCCCCGTTCAAATTAAAGGAACGGAAACCAATTTTGTAACAGCAACAACTTTCAGCGCGATTCGAACCTGGACCGTTACGGATTCCTGCAGCAACGTTGCGACTTGCAGCCAAACGATAACGGTGGTGGACACGGCACCTCCGAACCTGGTTTGTCCGTCCGAGGTCGTCGCGGCCGAGTCTCCGGCAGGATCAGGCGGAGCGATTGTCACCTTCGGCATCCCATCCGGATCGGATGTGTGTTCCACGCCCGCTGTTATCACGGTTCCACCGTCCGGGGCGGTATTTCCCATAGGTGAAACCCTGGTCACAGCGGTGGCCACCGACGCGTCCGGCAATACCAACTCGTGCACCTTCATGGTGAAGGTCGTCCCGGGCACCATCCGCGTGGCGAGCACGGGAGACTCGGGGCCCGGAACTCTGCGGGCCGCACTGACGGAGGCCAACCTGCTGCCCGACACCAACCAGATTTTCTTCGCGCTTCCTGGCGCCGGGCCGCATCAAATCGCGCTGCAATCGGCCTTGCCATCACTTCTATATCCTGCGGCCGTCGACGGGGGCAGCGAAGCCAAGTCCAGCGCGCCGGCCATCGAACTGGTGGGCTCGACAGCCTCTAACTCGTTCCCGGGATTGGTTCTTGAATCCAGCAATTGCGTGGTTCGCGGTTTGAGCCTGAACGGTTTCACCGCGGCTTTGCGCGTGGCAGGGGGGGGCGGCCACGTGATTCAGGGCAACTCGATCGTCGGCGGGCTGAATCAAGCCGGCTCTTCCAATGAGGGCACGGGAATCGTTATCGTGTCACCCCGCAACCTCGTCGGCGGCGAGGGCAGCGGATTGGGAAACGTGGTGTCGGGCAATTCAGGGCACGGCATGCTCTTGACCGGCGGCGGCGCGACCGGCAACCGTTTGATCGGGAACCTCGTGGTTTCGAACCGGCTCAATGGCATCTCGCTCGACTCCTCCGCCGGCGCAGGGAACGCCATTCTCGGGAACAGCATCTACGCCAACGGCGGTCTGGGGATCGACCTGGGAGGGGACGGTGCGACCCCGAATGACGACGACATCGCGGAAACCGGCCCGAACCGTTTTCTGAACAGCCCGGTTTTGTATGGACTCAGAGTGACCAGCAATACTGTTGTGGTGGAGGGCGCGCTGCAGAGTGAGAGCAACCGGACCTACCGGGTCGAGTTCTTCCAAAACGACACCTCGGACGGTAGCGCTTACGTCGGGGGACAGACTTTTCTCGGATATGTGTCCGTCACAATAACCGGGAGCGCTCCTGAGCCCTTCTCGTTCGTGCTGCCAATGGCGCCGGGCACAAATCAGGTCATTACAGCCACGACCACTGACCCGGCTTTCAACACTTCCGAGTTTTCGACGGCGGTCGCAAAACGCCTGGGGCCTCCGATCGTGGAGGACAACCCCTCGACCACGAACGTCGTCCAGGGCCAGACAGTAACTCTTTGCGCGACAGCGTCAGGCACGCCGCCGATTCGCTACCAGTGGCGTTTGAATGGCGTTAATATTCCGGATGAAACCAACCGGTGCCTGAACATCACCTCGATTCAGTACTCCAACGGCGGCACCTACACCGTGCTGGTGGAAAATCCGCTGGGTGCGGCGAGCTCACTGGCCGAAGTCGGTGTGGTACACCTGGAAAGCGCCATTCACCGGCGTTGTCACCGTGGAAACGCGGGGTAG
PROTEIN sequence
Length: 683
VDTTPPVVTCASNQVIEYGTAWNFVAPTAIDIADGRDLTYAVIGTTTNGNCGKTFVATRTWSVTDACGNSNTCSQVVAVVDTTPPAITCASNLVVECGDAWTFTPPTAVDIADGDSLPVQIKGTETNFVTATTFSAIRTWTVTDSCSNVATCSQTITVVDTAPPNLVCPSEVVAAESPAGSGGAIVTFGIPSGSDVCSTPAVITVPPSGAVFPIGETLVTAVATDASGNTNSCTFMVKVVPGTIRVASTGDSGPGTLRAALTEANLLPDTNQIFFALPGAGPHQIALQSALPSLLYPAAVDGGSEAKSSAPAIELVGSTASNSFPGLVLESSNCVVRGLSLNGFTAALRVAGGGGHVIQGNSIVGGLNQAGSSNEGTGIVIVSPRNLVGGEGSGLGNVVSGNSGHGMLLTGGGATGNRLIGNLVVSNRLNGISLDSSAGAGNAILGNSIYANGGLGIDLGGDGATPNDDDIAETGPNRFLNSPVLYGLRVTSNTVVVEGALQSESNRTYRVEFFQNDTSDGSAYVGGQTFLGYVSVTITGSAPEPFSFVLPMAPGTNQVITATTTDPAFNTSEFSTAVAKRLGPPIVEDNPSTTNVVQGQTVTLCATASGTPPIRYQWRLNGVNIPDETNRCLNITSIQYSNGGTYTVLVENPLGAASSLAEVGVVHLESAIHRRCHRGNAG*