ggKbase home page

PLM4_5_b1_sep16_scaffold_13329_5

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 1511..2398

Top 3 Functional Annotations

Value Algorithm Source
Toprim domain-containing protein Tax=Nitrosococcus oceani RepID=Q3JF01_NITOC similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 267.0
  • Bit_score: 242
  • Evalue 4.30e-61
TOPRIM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 267.0
  • Bit_score: 242
  • Evalue 1.20e-61
Toprim domain-containing protein {ECO:0000313|EMBL:ABA56595.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 267.0
  • Bit_score: 242
  • Evalue 6.10e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosococcus oceani → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
GTGATCGTCGCGCATGCCGACATTCGGGACTCGGTTTTCCAGCTTCATAAATCCGGTGGGTTACCGCGTGGTTCATCTACCGGCTGGCCATCGGTTGACCGCTGCTACACCGTGGGCCTCTCGCAATGGACGTTGGTGACCGGGGTTCCCCATGCCGGAAAGTCAGAGTGGGTTGATGCCTTGATGGTCAACCTGGCGATGCGTGAGCCGTGGCGCTTCTACATTTTTTCCCCGGAGAACTGGCCGCTCGCAATTCACCACGCCAAGATTTTGGAGAAGTACATCGGCAAGCCGTTCAACCCCGGTCCGAACGCGCGCATGGACATCGAGGACGTTGACTCCGGCGAAGCGTGGATGGAGGACAAGTTCTTCTTCTGCAAGCCGGACGTTTCGAACCTGCAATCCATCCTCGGCGATGCGGCGCTGGCCGAGCCTTTCAACAGGGAGCCGACGCGACCGTGGAAGCTCGGCGTCATCGTCGATCCGTGGAACCAGCTCGAGCACAACCGTCCATCGAACTTGAGCGAAACAGAATACGTCAGCCGCGAATTGTCATTCGCAATCGAATGGGCGCGGACTTGGAATGCTCACCTCTGGATCATCGCGCATCCCTCCAAGATGCAACGCGACCGCGACGGGAAATATCCGATACCGACGCCGCGCGACGTGTCCGGTTCCGCCCACTTTTGGAACAAGGCCGACAACTGCATCACGGTGCACCGGGACCACGTCGAGGACAACCAAGACGTTGACATTCACATTCAGAAGGTGCGCCACAAGAACATCGGTCGCATCGGTCTCGTCACGCTGCGCTACGACCGCGTGACGGGGCGTTACCACGAGATGCCGCTGCAGGCTGCTAAACATTACTCAAACCGGGACGACTGA
PROTEIN sequence
Length: 296
VIVAHADIRDSVFQLHKSGGLPRGSSTGWPSVDRCYTVGLSQWTLVTGVPHAGKSEWVDALMVNLAMREPWRFYIFSPENWPLAIHHAKILEKYIGKPFNPGPNARMDIEDVDSGEAWMEDKFFFCKPDVSNLQSILGDAALAEPFNREPTRPWKLGVIVDPWNQLEHNRPSNLSETEYVSRELSFAIEWARTWNAHLWIIAHPSKMQRDRDGKYPIPTPRDVSGSAHFWNKADNCITVHRDHVEDNQDVDIHIQKVRHKNIGRIGLVTLRYDRVTGRYHEMPLQAAKHYSNRDD*