ggKbase home page

PLM4_5_b1_sep16_scaffold_18661_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(1144..1806)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 218.0
  • Bit_score: 326
  • Evalue 1.80e-86
Endonuclease III Tax=Pedosphaera parvula Ellin514 RepID=B9XSN1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 218.0
  • Bit_score: 326
  • Evalue 1.30e-86
nth; endoIII-related endonuclease similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 214.0
  • Bit_score: 261
  • Evalue 1.50e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 663
ATGCCAAGAGAATCGCTTCAGCAGAAAACGGAGCGCACGCGGAAGGTAATCGCGGCGCTACAAGCGACCTATCCGGATGCGCACTGCGAGTTGGATCATCGCAATCCACTTGAACTGCTCATCGCCACCATTCTCTCCGCGCAGTGCACCGACAAGCAGGTGAACATCGTGACGGCGGAGTTGTTCAAGAAATACCGGACAGCAGCGGACTACGCCAACGCCACGCCGTCCGAGTTCGAGCAGGACATCAGGCGCATCGGGCTATTCCGGGCCAAGGCGAAGAACATTCAAGCCTGTTGTCGCGCGCTCATCGAGAAGCACAGCGGCCAAGTGCCGCGCACAATGGACGAACTGACCGCGCTCAGCGGTGTCGGGCGCAAGACCGCCAATGTGGTGCTGGGCAATGCCTTCAACATCAACGTCGGCGTGGTGGTCGATACGCACGTCGGACGGCTGTCGAATCGGCTCGGACTGACCAAGCAAACGTCAGCGGAAAAAGTGGAGCAGGATTTGCAGAAACTGGTGCCGCGCGAGCAGTGGTGCCTGTTCAGCCATCTGCTCATCTGGCACGGGAGGCGACGGTGCGCCGCCCGCTCGCCGGATTGCGCGGGCTGCGAGATTGCGCTGTTGTGCCCGAAGCTCAGCGTGAAACAGAAGCCATGA
PROTEIN sequence
Length: 221
MPRESLQQKTERTRKVIAALQATYPDAHCELDHRNPLELLIATILSAQCTDKQVNIVTAELFKKYRTAADYANATPSEFEQDIRRIGLFRAKAKNIQACCRALIEKHSGQVPRTMDELTALSGVGRKTANVVLGNAFNINVGVVVDTHVGRLSNRLGLTKQTSAEKVEQDLQKLVPREQWCLFSHLLIWHGRRRCAARSPDCAGCEIALLCPKLSVKQKP*