ggKbase home page

PLM4_5_b1_sep16_scaffold_22597_6

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(6060..8549)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000373F83E similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 678.0
  • Bit_score: 384
  • Evalue 2.00e-103
spore coat protein CotH similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 888.0
  • Bit_score: 352
  • Evalue 2.40e-94
Spore coat protein CotH {ECO:0000313|EMBL:ADE54755.1}; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.0
  • Coverage: 888.0
  • Bit_score: 352
  • Evalue 1.20e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coraliomargarita akajimensis → Coraliomargarita → Puniceicoccales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2490
CAGGGGACCGATTTCTTCGGCAATCCCAGCCTCCTGGGCGTGCGCTGGTGGCAGCGGCTCTTCCAGGATCCTGATTTTTGGCAGGCGTGGATTGATCGCTGGACGGAGCTGCGCGGGAGTGTGCTTTCCACCAACCATCTTTTCGCGCTCACGGACGCCTTTGGCAACCAGGTTCGCAACGCCCAAACCCGCCAGGCCGCTCGCTGGTCCTACACCGCCGCCCGCGGCGGCGCGGTTTCCTACCAGGGCTATTACTACCCCTTCCCCGGCACTTACCAGGGCGAGATCAACTTCCTCAAGCAGTGGCTCGCCGACCGCGTGAATTTCATCGACACGAATTTCCTGCGCGCCCCCGTCTTTAGCCAGCCGGGCGGCAATATCACCAACGGCTTCGTGCTCACCGTCTCCCCCTCCGCCACCCTCCCGGGCACCGTCACCTATTACACATTGGACGGCACCGATCCCCGGACCCGCGGGGGCGGTCTGGCTGCCGGCGTGCGGTCCAACACCGGCACGCTCTACCTGACGCTGGTGAATAATGCCCGGGTTTTCGCGCGCAATTTCAATCCCAGCCATGCCAACGTGACTAATTACCCGGGTTCCGTCGGCGGCAATCCGCCGATCTCCAGTTCCTGGTCGGGGCCCGCCATCGGCACGTTCGTGATCAACACCCCGAAGCTGGTGATCTCCGAGATCATGTATCACCCGGCGGCGCCGGCCACCGGCACCAACAGCGCGGGCGACTTCGAGTTCATCGAACTCAAGAACTCCGGCGCCACCACCATCAACCTGGTGGGCTTCCGCTTCACCAACGGCATCAGCTTCACCTTCACCGCCACCAACTCCATTACCCAGCTCGCCGCCGGACAGTACCTCGTCCTCGTGCGCAATCGCGCGGCGTTCCTCACCCGCTACCCCGCCCTCAACAACATCGCCGGCGAATACACTGGCAGCCTCGAAAATTCCGGCGAACGGCTCGCCCTCCTTGGCAGCCTGGGCGAACCCATTCACGATTTCAGTTTCGGCGACAGTTGGTATCCCGTCACCGATGGCCTCGGCTTCTCCCTGGTAATCCGCAACGAGAGCGCCCCTGCCAACATCCCGGCCGTCGTCGTCACCGAAGCTCTGACGCACACCGACCCGCCGCAGATCGACACCATCGAACTCTACAACCCCACCGCCAGCCCGGCGCCCATCGGCGGCTGGTTCCTCACCGATGATCCGGAGGAACCCTTCAAATACGCCATCTCCTCCAACGTCGTGATCAACCCTGGCAATTACGTCACCTTCACTCAGGAACAGTTCGGCGCCGGGGCCGATGGCTTCGCCCTCGACTCCACGGGCGACGAAGTCTACCTGTTCTCGGCCGCGGGCGGAAACCTCACCGGCTATCGGCACGGGTTCAAATTCGGGGCCCAGATCAATGGCAATTCCTTCGGCCGGGTTGTCACCAGCGAGGGGAAAGAGCATTTCATTCGTCAAACTGACCTGAGCCTCGGCGGCGCCAACCTCGGCCCCAAAATCGGCCCCGTCGTGATCAGTGAAATCCATTTTGCGCCCCCGGCCTTCGGCTCCAGCGCCAACAACCTCGAGGAATTCGTCGAAGTCCATAATGCCTCCTACGAGCCGGTCCTGCTCTTCGATCCGAACCACGCGACCAACACCTGGAAGCTCGGCGGCGGCATCGAATTCACTTTCCCGGAAGGCGTCGTCCTGCCCGGTTTGGGTCATGGCGTCGTGGTCAATTTCGACCCGCTTTGCGACCCCGTCGCGCTCAATTGGTTCCGCGCCCGGTTCAACCTCGGAACCGACGTCTCAATTTTCGGTCCCTTTGGCGGCCAGTTAGCCAACGAAGGCGACCGCGTCAGCCTCTACCAACCGGACCGCCCGCAGGTGGCGCCCGCTCCCGATGCCGGCTTTGTGCCCTACGTTCTTGCTGACCAGGTCGATTTCCTCCCGGGCTCGCCTTGGCCAACCGGCACCCTGGAAACCGGCAAATCCATGGCCCGCAAGGACGCCGCCGCATTCGGCAATGAACCTTTGAACTGGATTGCTGCCGATCCTTCCCCCGGTCGCGCCAATCCGGGCGCAATCGTCGCCGACCGCGATCTGGACGGCCTGCCTGACGCCTGGGAACTTGCCAACGGTTTCGACCCGCTTAATAGTGGCGGCTCGCAGGGTGCGAGCGGCGATCCCGATGGCGATGGCTCCAGCAACTGGGATGAATACATCGCCGGCACCGATCCCAACAATCCCGCCGACGCCCTCAAGATCGTCGCGCTGACCATCACCGGCCAGACGCTCTCCTTCCAATTCAACACCAAGCTCGACCGCACCTACGAAGTCCAGCGCCTCGACACCATGGGCGGCGCAAACGTCTGGGTCCCCTGGCTCCTGAACCGCAAAGGCACCGGCCAGATGTACCAGGTCATCGACCCGGTGGATTCCAGCTCTCGCTACTACCGCATCAAAGTCACCCCGCCGTTCTGA
PROTEIN sequence
Length: 830
QGTDFFGNPSLLGVRWWQRLFQDPDFWQAWIDRWTELRGSVLSTNHLFALTDAFGNQVRNAQTRQAARWSYTAARGGAVSYQGYYYPFPGTYQGEINFLKQWLADRVNFIDTNFLRAPVFSQPGGNITNGFVLTVSPSATLPGTVTYYTLDGTDPRTRGGGLAAGVRSNTGTLYLTLVNNARVFARNFNPSHANVTNYPGSVGGNPPISSSWSGPAIGTFVINTPKLVISEIMYHPAAPATGTNSAGDFEFIELKNSGATTINLVGFRFTNGISFTFTATNSITQLAAGQYLVLVRNRAAFLTRYPALNNIAGEYTGSLENSGERLALLGSLGEPIHDFSFGDSWYPVTDGLGFSLVIRNESAPANIPAVVVTEALTHTDPPQIDTIELYNPTASPAPIGGWFLTDDPEEPFKYAISSNVVINPGNYVTFTQEQFGAGADGFALDSTGDEVYLFSAAGGNLTGYRHGFKFGAQINGNSFGRVVTSEGKEHFIRQTDLSLGGANLGPKIGPVVISEIHFAPPAFGSSANNLEEFVEVHNASYEPVLLFDPNHATNTWKLGGGIEFTFPEGVVLPGLGHGVVVNFDPLCDPVALNWFRARFNLGTDVSIFGPFGGQLANEGDRVSLYQPDRPQVAPAPDAGFVPYVLADQVDFLPGSPWPTGTLETGKSMARKDAAAFGNEPLNWIAADPSPGRANPGAIVADRDLDGLPDAWELANGFDPLNSGGSQGASGDPDGDGSSNWDEYIAGTDPNNPADALKIVALTITGQTLSFQFNTKLDRTYEVQRLDTMGGANVWVPWLLNRKGTGQMYQVIDPVDSSSRYYRIKVTPPF*