ggKbase home page

PLM4_5_b1_sep16_scaffold_26121_5

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(4059..4976)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator Tax=Verrucomicrobium spinosum RepID=UPI0001744BA4 similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 306.0
  • Bit_score: 301
  • Evalue 6.20e-79
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDY19508.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 291.0
  • Bit_score: 286
  • Evalue 3.80e-74
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 29.5
  • Coverage: 258.0
  • Bit_score: 129
  • Evalue 1.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 918
ATGAGTCGGAAGCCCGAAGCATTGACCGATCTGACCACTCACAGTACCCGCACGCACATGCGCGGCGTGCGTGCTCCCAACGCCGAATCTCGTCCCTGGATCGAGGACTTCCCGGTATGCCAGGCCCTCAGCCAATACCAGATCATACACATGGGAATTGAGGAGGCCGTCGCTCCCATGAGAATCGTCCGAACCCGCCAGACCACCACCTATTTCCTCGCTTGTTTTGGCGGGCGTGGCCGCGTGCTGATCGATGGCCGCTGGCGCATCTGCCGGGACGGTTTCGCCTGCCTGCTTCCGGCACACACACTGAACGCCTTCGAAGCCATTGGCGGGAGCAAATGGGAGTTTTGCTGGGTGTGTTTTCAGCGCCCCTCCGAGCAGCGGCCGATTGCGGACATCACCACTCCCGTCATGGCGCGATTCGAAGCCCTTCCCCTGCGCTCTGCCATCCTCGGCCTGATGCACGAGTGCAACGGGCCCGGACAGCCAACGCTTATCCAGGAGTGGACGGATCTCGTCCATGCCTACGTGCTGCGGTTTGCCCAACCTGCCGATCATCCCGACCATTTGCGCGTGCTCTGGGAGCGGGTCGCCAGGAATCTCGCGGATGATTGGACTCTGGCCCGTCTGAGCCGGGAGGCGGGCTACAGCAACGAACACCTCCGCCGCCTGTGCCGGCGCCAGCTCGGCCGCAGCCCCATGCATCAGGTGACCTACCTGCGCATGCGCAAAGCCGCCGACCTCCTGGCTGTTTCCGAGAAAACCATCGAAGACATTGCGTTCGAGATCGGCTATCATAATCCCTTCGTTTTTTCCAACGCCTTCACCAAATGGATTGGCTGGCGGCCTTCGGACTACCGGAAGAAGCGGCTCGGCCCCCGCCTCAAGACAGAACCGGAAACCGGCCGCGCCTGA
PROTEIN sequence
Length: 306
MSRKPEALTDLTTHSTRTHMRGVRAPNAESRPWIEDFPVCQALSQYQIIHMGIEEAVAPMRIVRTRQTTTYFLACFGGRGRVLIDGRWRICRDGFACLLPAHTLNAFEAIGGSKWEFCWVCFQRPSEQRPIADITTPVMARFEALPLRSAILGLMHECNGPGQPTLIQEWTDLVHAYVLRFAQPADHPDHLRVLWERVARNLADDWTLARLSREAGYSNEHLRRLCRRQLGRSPMHQVTYLRMRKAADLLAVSEKTIEDIAFEIGYHNPFVFSNAFTKWIGWRPSDYRKKRLGPRLKTEPETGRA*