ggKbase home page

PLM4_5_b1_sep16_scaffold_25672_4

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 4688..4882

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 65.0
  • Bit_score: 79
  • Evalue 2.00e-12
Formamidopyrimidine-DNA glycosylase Tax=Pedosphaera parvula Ellin514 RepID=B9XRC9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 65.0
  • Bit_score: 79
  • Evalue 1.40e-12
mutM; formamidopyrimidine-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 65.0
  • Bit_score: 63
  • Evalue 1.30e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 195
ATGCCCGAACTGCCCGAAGTCGAAATCCTCGTCCGCCATCTCCGACCGCTGCTGAAACGCCGCACCATCCGTGGCGTCGACATCCGCCGACCCAAATCCCTCGGCGGCACTCCTGCCCACACCTTCGCGCTAGCCCTAACCGGCGCCACCTTCACCAACCTGAACCGACGAGGCAAATACCTAATCTTCCACCTC
PROTEIN sequence
Length: 65
MPELPEVEILVRHLRPLLKRRTIRGVDIRRPKSLGGTPAHTFALALTGATFTNLNRRGKYLIFHL