ggKbase home page

PLM4_5_b1_sep16_scaffold_33121_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 1655..2233

Top 3 Functional Annotations

Value Algorithm Source
TatD-related deoxyribonuclease Tax=Pedosphaera parvula Ellin514 RepID=B9XDN2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 188.0
  • Bit_score: 236
  • Evalue 2.00e-59
TatD-related deoxyribonuclease {ECO:0000313|EMBL:EEF62178.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 188.0
  • Bit_score: 236
  • Evalue 2.80e-59
TatD-related deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 213.0
  • Bit_score: 176
  • Evalue 5.40e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 579
ATGGCCCAGGTGAAGTTGTACGACGCTCACAACCACTTGCACGACGAGCGATTGGCCCCGTACCTGGAGGCCATCCTCCCGGCGGTCGCGGCCAGCGGCATCGAAAGGATGGTCGTAAATGGCTCGTGCGAGGAGGACTGGCCGGCGGTTTTGGCGCTGGCGAAAAGCAATCCAAGGGTGTTGCCTTCTTTCGGGTATCACCCCTGGTATATCCGGGAACGCACGACCGGCTGGCTGGAGAATTTGGCGAGTTTTCTCGACGCGGCTCCCGGGGCTGTCGGCGAAATCGGGCTGGATAAATGGATCAAGAACCACGACCTGGAGGACCAGGAGCGGGTGTTCGCCGCCCAACTTCAACTGGCCGCCGATCGGAACCTGCCCGTCAGCATTCATTGTCTGCAGGCCTGGGGAAAGCTGCTTGCGGTGCTGCGCCGTGCGCCCCGACCGCGCCGTGGCTTTGTGCTCCATTCGTTTGGCGGACCGCGGGAGATGATTGATGAATTGGCCGGACTGGGCGCGTATTTTTCGCTGCCCGGCTACTTTGCCCAGGCTCGCAAGGATCGCCAGCGGGAGACCTTT
PROTEIN sequence
Length: 193
MAQVKLYDAHNHLHDERLAPYLEAILPAVAASGIERMVVNGSCEEDWPAVLALAKSNPRVLPSFGYHPWYIRERTTGWLENLASFLDAAPGAVGEIGLDKWIKNHDLEDQERVFAAQLQLAADRNLPVSIHCLQAWGKLLAVLRRAPRPRRGFVLHSFGGPREMIDELAGLGAYFSLPGYFAQARKDRQRETF