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PLM4_5_b1_sep16_scaffold_41070_1

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 3..257

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XAV3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 80.0
  • Bit_score: 104
  • Evalue 4.00e-20
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF63138.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 80.0
  • Bit_score: 104
  • Evalue 5.60e-20
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 81.0
  • Bit_score: 84
  • Evalue 9.30e-15

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 255
CCTTCACGGACCCTGGAGGCCACGTGGGATGAAGAGTGGGAGGCAAACCTCGTCACGAACGCCGCCGAGCGAGTGAAATTGAAAGTGGACCCGGAGCAATACCAGATGTTCGACCTTTACGTGATCAAGCAATGGCCGGCCTCCCGGGTGGCAAAAGTTCTGCGCGTGCGAACCGGGAGTGTTTACCTCGCCCGCCACCGCATCGGCAAGCTGCTGAAGAAGGAAATCGCCGCCTTGCGCGAAAAACCGCTGTAA
PROTEIN sequence
Length: 85
PSRTLEATWDEEWEANLVTNAAERVKLKVDPEQYQMFDLYVIKQWPASRVAKVLRVRTGSVYLARHRIGKLLKKEIAALREKPL*