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PLM4_5_b1_sep16_scaffold_86992_1

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(2..778)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Pedosphaera parvula Ellin514 RepID=B9XQY9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 259.0
  • Bit_score: 408
  • Evalue 3.10e-111
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EEF57766.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 259.0
  • Bit_score: 408
  • Evalue 4.30e-111
sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 258.0
  • Bit_score: 265
  • Evalue 9.10e-69

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 777
ATGGCTAAGGTGCTTTTGGTGGACGATCAGTTGACCATGGTGCAGACGATGTCCGAGTTGCTGCGGGCGGAAGGGCACGAGATCATACCCTGCACGAATGCAACGGCAGCTCTGGCTGCACTGGCTTCGAATGCGCCGGAGTTGGTGATTACCGATCTATACCTGGATAAAACTCGCGCTCACGGCCTGGAAATCCTTCAGAAAGCGCGCGAGCAGAACCCTCCCGCGGTGGTGATCGTGGTTACCGGTTTCGGTTCCATTGAGACGGCGGTCGAGGCGATGAAGCACGGCGCCTTCGATTACCTTGAAAAGCCTTTTCCCGCCGACGAATTCAAGATGTGTGTCACCCGGGCGCTCACTTACAACGCTGCGGTCTCGGAGTCGGCCTACCTGCGCAAGCAACTGAAGAAGAAATATCAGTTCAGCCAGATTGTCGGAAACGCGTCCAGCATGCAGCGGGTTTTCAAAATGATCGAGCGGGTGGCGGATACCGACAGCACGATCCTGATTCTCGGCGAGAGCGGCACGGGCAAGGAATTGGTGGCGCGCGCCCTGCATTTCAACAGCCGTCGGCAGATGGCCCCGTTTATTCCCATCAATTGCACCGCGCTGCCGGAAAACCTCCTCGAATCCGAGTTGTTCGGCCATCGGCGCGGCGCCTTCACCGGTGCCATCAACGACAAGAAGGGCCTTTTCCAGGAAGCCGATGGCGGGACTATTTTCCTCGATGAAGTCGGCTCCATGCCACCCATGCTGCAAAGCCGCCTGTTGCGCGTC
PROTEIN sequence
Length: 259
MAKVLLVDDQLTMVQTMSELLRAEGHEIIPCTNATAALAALASNAPELVITDLYLDKTRAHGLEILQKAREQNPPAVVIVVTGFGSIETAVEAMKHGAFDYLEKPFPADEFKMCVTRALTYNAAVSESAYLRKQLKKKYQFSQIVGNASSMQRVFKMIERVADTDSTILILGESGTGKELVARALHFNSRRQMAPFIPINCTALPENLLESELFGHRRGAFTGAINDKKGLFQEADGGTIFLDEVGSMPPMLQSRLLRV