ggKbase home page

PLM4_32_b1_sep16_scaffold_270_14

Organism: PLM4_32_b1_sep16_Flavobacteriales_Flavobacteriia_35_11

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(15603..18572)

Top 3 Functional Annotations

Value Algorithm Source
Protein-export membrane protein SecD / Protein-export membrane protein SecF Tax=Flavobacterium frigoris PS1 RepID=H7FRL1_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 989.0
  • Bit_score: 1695
  • Evalue 0.0
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KFC58463.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 988.0
  • Bit_score: 1729
  • Evalue 0.0
bifunctional preprotein translocase subunit SecD/SecF similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 992.0
  • Bit_score: 1545
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. EM1308 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2970
ATGCAGAATAAAGGACTTATTAAATTTTTCGCAATTCTATTTGCATTGGTAAGTATTTACCAACTTTCTTTCACTTTTGTCTCAAGCAAAATAAAAAGTGACGCAAAAACTTTTGCTGGTGGAAATCCAGAAAAGGAAGTAAAATATTTGGATTCTATCGGTAAAGAAAAAGTGTTTAGCTTAGGTTTTACTGATTTTACTTTCAACGAAGTAAAAGACAAACAAATCAACAAAGGTCTTGACTTAGAAGGTGGAATCAACGTGATTCTTCAAATTTCAGTGAAAGACATCTTGAAAGGATTGTCTAATCATTCAAAAAATCCAGTTTTTAATAAATCTTTGGCTGATGCCACTGCAAATCAAAGAGGAAATCAAACGTACCTTGACGCGTTCTTTGAAGCTTTTGAAGCTAACTCTAATGGGACTGTAAAATTAGCGTCTCCAGATATTTTTGCAAACAGAAGTTTGCAAGGTGAAGGTGGTGTTACTTTTCAAATGACAGATTCACAAGTTCAAAAAGTAATCAAAAGAAAAGTTGATGAATCCGTTGAAAGTGCTTTTGGAGTACTAAGAAAACGTATCGATAAATTTGGTGTAACTCAACCTAATATTCAAAAAATAGGTGAGACTGGAAGAATCCTTGTTGAGCTTCCGGGAGCTAAAGATGTGGATAGAATCAAGAAATTATTGCAAAGTACCGCTCAATTAGAGTTTTGGGAAACGTATAAAATTGAAGAAATCGGTAATTTCATGATGGCTGCAAATGAGGCATTGAAAAAAACTGAAATCATTAAGGTTGAAACTAAAACAGTTGCAAAGGATTCATTAAGTGCTTTGTTGACTGATGGTAAAGATTCTGCTGCTACTAAAAAAGGAAATAATCCTTTATTAGACAAAATTGTTGCTCAAGGTGGTGGACCAGTTTTAGGTCTTTTCTCTCCAAAAGATACAGCTGCTATAAACTCTTATTTTAAAAGAGCTGACATTAGAGTTTTATTGGCAGGAGACCAGCGTTATGCAAAATTTGTTTGGGGAAAACCAACTACAATTAAAGACGCAAAAGAAAAAGAAGTTGAAGTTGTAGAACTTTATGCTTTAAAAGGAAATAGAGACAATATTGCTGCTATGGGTGGTGGTGTTGTAACAGATGCCAGCGATACGTTTGATCAATTGGGTAAACCTGCGGTTTCTATGCAAATGAACAACCAAGGTGCAAAAGCTTGGGAAGAATTGACAGGAAGGGCTTATACTCAAAAAAGTAATATCGCTATCGTTCTTGATGATATTGTATATTCTGCTCCAGGGGTTTCAAGTGGACCTATTGCTGGTGGAAGATCTGAGATTTCAGGATCTTTTGATGTTACAGAAACTAAAGATTTAGCAAACGTATTAAGAGCAGGTAAATTGCCAGCTGCTGCCGAAATAATCCAATCAGAAGTGGTAGGACCATCCTTAGGTCAAGAAGCTATTGATAATGGTACTAAATCGGCTATTATAGGATTGCTTTTAGTATCGTTGTGGATGTTGGTTTACTACGGTAAAGCAGGATGGTATGCAAATATTGCATTGGGTGTTAACTTATTGTTTATGTTTGGTATTTTAGCAAGTTTAGGTGCTGTGTTGACATTGCCAGGTATTGCAGGTATCGTTTTAACGATGGGTACTGCTGTTGATGCAAATATCATTATCTATGAAAGAGCTAAAGAAGAATTACGTGCAGGTTTGTCACTAGATGAAGCTACAAAAGTTTCTTATAGTTGGAAAGGGGCGATGCGTTCTATTGTTGATGCAAACGTTACACACATTTTAATTGGAGGTGTATTGTTTATCTTCGGTTCAGGACCAATCAAAGGATTTGCTACAACTTTATTAATTGGTATCGTAACTTCATTGTTTACTTCAATCTTTATTGCTAGAATTTTTATTGATAGAAATATTGCTTTTAAAAACAGCTTGACATTTGTAACTAATTTTTCTAAAAATTTCTTTACTAATTTTCATTTTGATTTCTTAAGAATCAAAAAAGGAACATACATTTTCTCTGCGGTTGTAACTGTAGTGAGTTTGTTTTCTATTTTTACAAATGGTTTTGACCAAGGAGTAGATTTCGTGGGAGGAAGAACTTTTCAAGTACGTTTTGAAAAACCAATGCAAGCTGAAGTTGTTAGAGATGAATTAACTAAAGTTTTTGGTAGTGCAGAGGTAAAAATATTTGGAAATGATAATCAATTAAAGATTACGACAAAATATAAAATTGAAGAAACTGGAAGTGCTGCTGATGAAGAAGTAAACAAAATGTTGTTTGAAAGCTTGAAGCAAAATTATTCTGCAGGCTTAACGTATGATAAATTCATAAATGCATATGAGGGTAAACAATTTGGGGTAGTGCTAGCTTCAAAAGTGGGACCAACAGTGGCTGAGGATATCAAAACCAATGCTTATTGGGCAGTTTTGGGAGCTATGGCAATTGTGTTTTTATATTTGCTTATCAGTTTCAGAAAATGGCAATATGGTTTGGGAGCGATTGCTGCCGTAGCGCATGATGTTATCTTCGTATTGGGGATTTACTCATTATGTTGGAAATTCATGCCGTTTGGTATGGAAATCGACCAACACTTTATAGCTGCGATTCTTACCGTTATCGGATACTCAATGAATGATACCGTAATTGTATTTGATAGAGTTCGTGAATTCTTGGATGGTAAAACTAAAGGTAGTTTTGGTGATATTGTAAACAAATCGATTAATTCAACGATGTCAAGAACCATCAATACGTCATTGACGATGATTGGAGTATTGTTAATCATGTTTATTTTTGGTGGAGAATCTATTAGAGGATTTATCTTCGCAATGCTTATCGGTATTGTTGTAGGAACTTATTCTTCATTATTTATTGCAACTCCGGTATTGGTAGATACTATTTCTACTGAAGACAAGAAAAGTGTTGAACTGCAACATCAAGAAGCATAA
PROTEIN sequence
Length: 990
MQNKGLIKFFAILFALVSIYQLSFTFVSSKIKSDAKTFAGGNPEKEVKYLDSIGKEKVFSLGFTDFTFNEVKDKQINKGLDLEGGINVILQISVKDILKGLSNHSKNPVFNKSLADATANQRGNQTYLDAFFEAFEANSNGTVKLASPDIFANRSLQGEGGVTFQMTDSQVQKVIKRKVDESVESAFGVLRKRIDKFGVTQPNIQKIGETGRILVELPGAKDVDRIKKLLQSTAQLEFWETYKIEEIGNFMMAANEALKKTEIIKVETKTVAKDSLSALLTDGKDSAATKKGNNPLLDKIVAQGGGPVLGLFSPKDTAAINSYFKRADIRVLLAGDQRYAKFVWGKPTTIKDAKEKEVEVVELYALKGNRDNIAAMGGGVVTDASDTFDQLGKPAVSMQMNNQGAKAWEELTGRAYTQKSNIAIVLDDIVYSAPGVSSGPIAGGRSEISGSFDVTETKDLANVLRAGKLPAAAEIIQSEVVGPSLGQEAIDNGTKSAIIGLLLVSLWMLVYYGKAGWYANIALGVNLLFMFGILASLGAVLTLPGIAGIVLTMGTAVDANIIIYERAKEELRAGLSLDEATKVSYSWKGAMRSIVDANVTHILIGGVLFIFGSGPIKGFATTLLIGIVTSLFTSIFIARIFIDRNIAFKNSLTFVTNFSKNFFTNFHFDFLRIKKGTYIFSAVVTVVSLFSIFTNGFDQGVDFVGGRTFQVRFEKPMQAEVVRDELTKVFGSAEVKIFGNDNQLKITTKYKIEETGSAADEEVNKMLFESLKQNYSAGLTYDKFINAYEGKQFGVVLASKVGPTVAEDIKTNAYWAVLGAMAIVFLYLLISFRKWQYGLGAIAAVAHDVIFVLGIYSLCWKFMPFGMEIDQHFIAAILTVIGYSMNDTVIVFDRVREFLDGKTKGSFGDIVNKSINSTMSRTINTSLTMIGVLLIMFIFGGESIRGFIFAMLIGIVVGTYSSLFIATPVLVDTISTEDKKSVELQHQEA*