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PLM4_32_b1_sep16_scaffold_128_15

Organism: PLM4_32_b1_sep16_Flavobacteriales_Flavobacteriia_35_11

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 14099..14608

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor Tax=Flavobacterium sp. WG21 RepID=UPI0003494453 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 169.0
  • Bit_score: 270
  • Evalue 1.10e-69
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KFC61026.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 169.0
  • Bit_score: 299
  • Evalue 1.80e-78
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 169.0
  • Bit_score: 267
  • Evalue 1.60e-69

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Taxonomy

Flavobacterium sp. EM1308 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 510
ATGAACCAAAATGAGTTTGTGCTTTTAATCAACCCTTTCAAAGATAAGCTCTTTCGATTGGCCAAACGATTACTGGTAAGCACCGAGGAAGCTGAAGATGCCACTCAAGAAATTTTGGTTAAATTATGGAGTAAAAATGGAAATTTAGATTCGTATAATAGTGTCGAAGCGATGGCAATGACAATGACCAAAAATTATTGTTTGGATCAATTAAAGTCGAAGAGAGCCAGTAATCTTAAAATTGTGCACAACAATTTTACGGACAGAGAACCGAGTTTAGATAAAAAAGTAGAAGACAGAGATAGTTTAAATTGGGTAGAGAAAGTCATTGATCAATTGCCGGAACAACAGCGATTAATCATCCAGTTACGGGATATAGAACAATGTGAATTTGAGGAAATTGCTAGAATATTGGAAATGAATGAAACTGCCGTGCGAGTGGCACTTTCAAGGGCAAGGAAAACAATTAGAGAATACATGTTAAAAACAAATAGTTATGGAATTAGATAA
PROTEIN sequence
Length: 170
MNQNEFVLLINPFKDKLFRLAKRLLVSTEEAEDATQEILVKLWSKNGNLDSYNSVEAMAMTMTKNYCLDQLKSKRASNLKIVHNNFTDREPSLDKKVEDRDSLNWVEKVIDQLPEQQRLIIQLRDIEQCEFEEIARILEMNETAVRVALSRARKTIREYMLKTNSYGIR*