ggKbase home page

PLM4_32_b1_sep16_scaffold_11195_3

Organism: PLM4_32_b1_sep16_Acidobacteria_64_8

near complete RP 45 / 55 MC: 4 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: comp(1988..2659)

Top 3 Functional Annotations

Value Algorithm Source
lolA1; hypothetical protein; K03634 outer membrane lipoprotein carrier protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 222.0
  • Bit_score: 152
  • Evalue 4.50e-34
outer membrane lipoprotein carrier protein LolA similarity KEGG
DB: KEGG
  • Identity: 29.2
  • Coverage: 216.0
  • Bit_score: 99
  • Evalue 7.40e-19
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 218.0
  • Bit_score: 323
  • Evalue 1.60e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGGGATCCATGAAGGTGCTCGTTGCCGCGGCGTTAGCCTTGGCGTCCGTCTGGACGCTCGAGGCGCAGAACGCCGATCCCGTCGCACTCGCCGCGAAGGTGCAACAACGCTATAACGGCATCAAGGATATCCAGGGCGACTTCGTCCAGACCTACGAAGGCGGCGTGCTGCGCACGAAGACCACCGAGCGCGGCACGGTCGCGATCAAACGCCCGGGCAAGATGCGCTTCACCTACATCAAGCCGGAAAAGAAAGAGTTCGTCTCGGACGGCACTCGCCTCTACACGCATCTCGTCGCGGACAAGCAGGTGATCGTGAGCCCCGCGCCAGGCGCCGATCAGGGCGACATTCCGGCGATGTTCCTCGCCGGCCAGTCGGACCTCGCGCGCGATTACACGCCGTCCTTCACACCGTTGCCCGGCGCTGCACCCGGCCTCGTCACGCTGAAGCTGGTACCCAGGAAGAAGAGCGAGGAATACGAGTCGATCGGGATCGGCGTCGACCCCACGACGCTCCAGATTCAGTTCCTCACCGCCGTCGACACCCAGGGCGGCCGATCGTCGTTTTCTTTCAGTAACCTGAAGGAAAACCGGGGGTTGACCGATAAACAATTCGAGTTTCGCATTCCACGCGGCGTCGATGTGGTAACTAATGGTGGCCGTGTTCAATAG
PROTEIN sequence
Length: 224
MGSMKVLVAAALALASVWTLEAQNADPVALAAKVQQRYNGIKDIQGDFVQTYEGGVLRTKTTERGTVAIKRPGKMRFTYIKPEKKEFVSDGTRLYTHLVADKQVIVSPAPGADQGDIPAMFLAGQSDLARDYTPSFTPLPGAAPGLVTLKLVPRKKSEEYESIGIGVDPTTLQIQFLTAVDTQGGRSSFSFSNLKENRGLTDKQFEFRIPRGVDVVTNGGRVQ*