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PLM4_32_b1_sep16_scaffold_13181_3

Organism: PLM4_32_b1_sep16_Acidobacteria_64_8

near complete RP 45 / 55 MC: 4 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: comp(1887..2375)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 147.0
  • Bit_score: 89
  • Evalue 2.60e-15
RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 147.0
  • Bit_score: 84
  • Evalue 3.10e-14
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 166.0
  • Bit_score: 179
  • Evalue 3.50e-42

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGGGACGTCTCGTGCAGGCGAACCTGCGCATGGTTGTTGGCTACGCGAAACGTTTTCGGCGTCTCGGCGTTCCGTTGCTCGATCTGATTCACGAAGGCAATCTCGGTTTGATCGAAGCCGCGCGTCGATTCAATCCGGCGCGCGCGGATTTTCCGGCGTCGGCGTTGTGGTGGATTCGCCAGGCGATGATGCACCTGTTGTCGGAGGCCGGCCGGACGGAGAATCCAACCACGTCGGGCCTGCTCGCCGCGGCGGTGCAGGGCCGGCAGGTCGACGCGATTCGCGTCGCGCTCGAATACGCGCAGGCGGCCGCCGCCGGCAAAGAGATCAAAGAGCCGCCCGTCGCAGACGCGGAGGACTTTGCCGCGCATATGCAGGATCAACGCCGGCGCAAGAGCCTGCGCAAGGCCCGCAAGCGCGGTAAAGCAGCCGCCGGCGATTTGCACGTGATTCGCCAGCACAGCGTCCTGCTCGGTTATCTGAACTAG
PROTEIN sequence
Length: 163
MGRLVQANLRMVVGYAKRFRRLGVPLLDLIHEGNLGLIEAARRFNPARADFPASALWWIRQAMMHLLSEAGRTENPTTSGLLAAAVQGRQVDAIRVALEYAQAAAAGKEIKEPPVADAEDFAAHMQDQRRRKSLRKARKRGKAAAGDLHVIRQHSVLLGYLN*