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PLM4_65_coex_sep16_scaffold_2415_19

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_54_17

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(22813..23376)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, RpoE Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASE6_PELPD similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 187.0
  • Bit_score: 207
  • Evalue 9.80e-51
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 187.0
  • Bit_score: 207
  • Evalue 2.80e-51
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:ABL00267.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 187.0
  • Bit_score: 207
  • Evalue 1.40e-50

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Taxonomy

Pelobacter propionicus → Pelobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAATTTCACGGAAAACGACCTTCCTGACGAACGCATCATCGAAGATGTCCTTGCCGGTAAAGACGGGGCGTTCATTCAACTGGTCAATAGATACAGGCGGAAAGTATTCGCCATGACCGCGCGTTTTGCCCGGGACAAGGATGACCTGGACGATATCTGCCAGGATATCTTCATAAAGGTCTACGAGAATCTGGGCAAATTCCGCGGTGACGCGCCGTTTGAGCACTGGCTGTCGCGGATCGCCATCAGGACATGCTACGATGCGCTGCGCAAAAGAAGAAGGGAAAAGGGGCATATACCCCTGGATGATATTCATTACCAGATAGCGGACGAATCGGGCGAAGAGTTACTGGTTGCGGAGGAGGCGCGAAGCCTTCTGGGAAAGGGCTTGGCGGAGTTGAAACCTGCCGAGCGGCTGGTTATAACACTTCTGGAGCTTGAGGAAAAACCGGTCAGGGAGATTGCCGAGCTGACCGGCTGGAGCGAGGTAAATGTCAAGGTCCGGGCATTCAGGGCCAGGCAGAAATTGAAACGCATCCTGGAGAAACACCATGAAAGATGA
PROTEIN sequence
Length: 188
MNFTENDLPDERIIEDVLAGKDGAFIQLVNRYRRKVFAMTARFARDKDDLDDICQDIFIKVYENLGKFRGDAPFEHWLSRIAIRTCYDALRKRRREKGHIPLDDIHYQIADESGEELLVAEEARSLLGKGLAELKPAERLVITLLELEEKPVREIAELTGWSEVNVKVRAFRARQKLKRILEKHHER*