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PLM4_65_coex_sep16_scaffold_1993_6

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: comp(7904..11911)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 1335.0
  • Bit_score: 1662
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 1341.0
  • Bit_score: 2261
  • Evalue 0.0
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 1335.0
  • Bit_score: 2444
  • Evalue 0.0

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 4008
ATGGCAGGCACGATTCAGTGTGGGCGTCGCAGTCGTCGGGACTTCGGGAAGATCCCGTCCATCGTGGAGATCCCGAACCTCATCGAGGTGCAGAAGCGTTCCTACGAGACGTTTCTGCAGAAGGACGTCCCCGCCGAGCGCCGGGAGGAGATCGGGCTGCAGGCGGTGTTCAAGTCGGTGTTTCCCATCGCCGACTACAACGACAACGCGCTGCTCGAGTTCGACTCGTACCATTTCGGAGATCCGAAGTACACGGTGGAGGAGTGCCACGATCGCGGCATGACCTTCGCGATCCCCCTGAAGGTCACGCTGCGCCTGGTCGTGTTCGACCATGATAAAGAAGCCAAGACCAAGACCATTCGCGAGCAGCGCGGCCAGGAGGTCTACCTGGGCGAGCTGCCGCTGATGACGGACAAGGGCACCTTCATCATCAACGGCACCGAGCGCGTGGTCGTCAGCCAGCTGCAGCGCTCGGCCGGCGTCTTCTTCGACGATGACAAGGGCAAGACGCTGGCGTCCGGCAAGCCGCTCTACTCGGCCCGGATCATCCCCTACCGTGGCTCGTGGGTGGAGTTCGACTTCGACGCCAACGACCTGCTGCACGTGCGCGTCGACCGGCGGCGGAAGATGTACGCCACCGCCTACCTGCGCGCGTTCTGGTTCCTGGAGAAGGGCGCCATCCTCTCCGACGAGGAGATCCTGGCCCAGTTCTACGACGTCGAGGAGGTGCTGAGCTTCGAGGACGGCAACGCCTGGGTGCGCGTGCATCCGGAGGCGTCGGTGGGGGCCAAGGTGGCCGACGACGTCAAGCCGCCCCGTCACCGCGAGTCGATCGTCACCGCCGGCAAGGTGCTCAACGCCAAGCTGGTCGAGAAGCTGGTCGAGGCCAACGTCGAGAAGATCCCCCTGCGGGCCGAGGCGCTGGTCGGCCGGCGCACGGCCACACGCATCGTCGACACCGAGAGCGGCGAGGTGCTGGTCGGCACCAACACCGAGCTGACCTCGACCGTGCTGACGCAGGTGATGAGCCGCCGGGTGGCGCCGTTCAAGCTGCTGGTGCTCAGCGCCGGCAAGATCGACGCCTCGCTCTACGAGACGCTGGCGCGCGATCACGTCAAGAACCCCGACGAGGCGCTGGTCGAGATCTACCGCAAGCTGCGGCCGGGCGACCCGCCTACCGTGGAGTCGGCCCGCGCCCTCTTCCGCGGCATGTTCATCGACGCCCGCCGCTACGACCTCGCCCGCGTCGGCCGCTTCATGATCAACGAGAAGCTGGGTATCGAGGCCCCGGCCAGTACGAAGACGCTGCGCAGCGAGGACATCGTCTTCGTCATCCGGCACCTGCTGACGGTCAAGCTCGGCAGCAAGCCGACCGACGACATCGACCATCTCGGCAACCGGCGCGTCCGCTCGGTCGGCGAGCTGCTGGAGAACCAGTTCCGGGTCGGCCTCACGCGGATGGAGCGGGCGGTGAAGGAACGGATGTCGATCTCCGACATCACCAACCTCATGCCGCACGACCTGATCAACGCGAAGCCCGTCTCCGCGGTGGTCAAGGAGTTCTTCGGCTCGTCGCAGCTCTCGCAGTTCATGGACCAGACCAATCCGCTCGCCGAGCTGACCCACAAGCGCCGGCTGTCGGCCCTCGGTCCGCGCGGTCTGAGCCGTGAGCGCGCCGGCTTCGAGGTCCGCGACGTGCACCCGACCCACTACGGGCGGATCTGCCCGATCGAGACGCCGGAAGGCCCCAACATCGGCCTCATCTCGTCCCTGTCCACGTACGCCCGCACCAACGAGTTCGGCTTCATCGAGACGCCGTACCGCAAGGTGGCCAGCGGCAAGGTGACCGACGAGATCGAGTTCCTCACCGCGCTGAAGGAGGAAAAGTTCGTCATCGCCCAGGCCAACGCGGAGATCGACCGTAACGGCAAGTTCATGCAGGAGCGCGTGTCAGCCCGGCGCGCCGGTGAGTACCGGATGGTGGCGCCGGAGGAGCTGCACTACATGGACGTGTCGCCCAAGCAGCTGGTGTCGGTGGCGGCCGCCCTCATCCCGTTCCTGGAAAATGACGACGCCAACCGCGCGCTCATGGGCTCCAACATGCAGCGGCAGGCGGTGCCGTTGCTGCAGCCGGAAGCGCCCCTGGTGGGCACCGGCATGGAGTACATCGTCGCCCGCGACTCCGGCTCGGTGGTGGTCGCCAAGCGTCCCGGCGTGGTCGAGTACGTGTCGGCCGACCGGGTGGTGGTGCGGGCGGAGAGCCGGTCCAAGAAGACCGACCCCGTCCAGGACCTGCCGCTCGACATCTTCAACCTGACCAAGTACCGGCGGTCGAACCAGAACACCTGCATCAACCAGAAGCCGATCGTGCGGAAGGGCCAGCGGGTGGCGGTCGGCGACGTCATCGCCGACGGGCCGGCCACCGACCAGGGGGAGCTGGCGCTCGGCCGCAACGTGCTGGTCGCCTTCATGCCGTGGGGCGGGTACAACTTCGAGGACGCCATCCTCGTGTCGGAGCGGCTGGTCAAGGACGACCGCTTCACCTCGATCCACATCGAGGAGTTCGAGGTGCAGGCCCGCGACACGAAGCTGGGGAAGGAGGAGGTGACGAGGGATATTCCGAATGTTTCGGAAGAAGCCCTGAAGGATCTCGACGACTCCGGAATCGTTCGAATCGGCGCGAAGGTGAAGGCCGGAGATATTCTAGTTGGAAAGATCACTCCGAAGGGTGAAACGCAGCTGACCCCGGAGGAGAAGCTGCTGCGGGCGATCTTCGGCGAGAAGGCCGGCGATGTGCGAGACACCTCGCTCACGGTGCCGCCCGGCATCGAGGGCACCGTCGTCGACGTGAAGGTCTTCTCGCGCCGCGGGGTCGACAAGGACGAGCGCGCCAAGTCGATCGAGGAGGAGGAGATCGGGCGGCTGGAGAAGGATTACCAGGACGAGATCGCCATGGTCGAAATGGAGCGCGACCAGAAGCTCAAGAACCTCCTGGTCGGCAAGACGTCTCTCAACGAGCTCTTCGATCCCACCAACAAGGTGCGCCGGGTCACCAAGAAGAGCGACCGTATCGAGCGGCCCGACCTCGACAACTTCTCCTGGAACGAGCTGAAGAAGGTGAAGGTCAAGGAGGACGAGGGCCTCGCCCAGATGGTCAAGAAGATCGAGGAGCTCGCCGAGGAGCAGATCTCGATCTACGACTCCATGCTGGAGGAGCGCATCGGCCGCCTGCGCCGCGGCGACGACCTGCCGCCCGGCGTCATCAAGATGGTGAAGGTCTACGTCGCCGTGAAGCGCAAGCTTTCAGTAGGAGACAAGATGGCCGGCCGTCACGGCAACAAGGGCGTGGTGTCCAAGATTCTTCCCGAGGAAGATATGCCCTTCCTGCCGGATGGGACGCCCGTCGAAATCGTCCTGAATCCCCTCGGCGTTCCGTCTCGAATGAACGTCGGTCAGATCCTCGAGACGCATCTGGGCTGGGCGGCCCGCGCGCTCGGCCTGTGGGTGGCCAGCCCGGTGTTCGACGGCGCCACCGAGCAGGAGATCAAGGAACACCTCAAGCAGGCCGGGATGCCGACGTCGGGCAAGACCAGGCTCTACGACGGCCGCACCGGCAAGCCGTTCCACCAGGAGGTCACCGTCGGCCAGATCTACATCCTGAAGCTGGCGCACCTCGTGGACGACAAGATGCACGCGCGCTCGATCGGGCCCTACTCGCTGGTCACCCAGCAGCCGCTCGGCGGCAAGGCCCAGTTCGGCGGGCAGCGGTTCGGCGAGATGGAGGTGTGGGCGCTGGAAGCCTACGGCGCCGCCCACACGCTCCAGGAGATGCTGACCGTGAAGTCCGACGACGTCGAGGGCCGCAACCGGATCTACGAGGCGATCGTGAAGGGCGAGAACTTCCTCGAGCCCGGCACGCCGGAGTCGTTCAACGTGCTCGTGAAGGAGCTCCAGAGCCTGGCCCTGGACGTCGAGCTGATCACCAAAAACGGAAAGAAGACGTCGTGA
PROTEIN sequence
Length: 1336
MAGTIQCGRRSRRDFGKIPSIVEIPNLIEVQKRSYETFLQKDVPAERREEIGLQAVFKSVFPIADYNDNALLEFDSYHFGDPKYTVEECHDRGMTFAIPLKVTLRLVVFDHDKEAKTKTIREQRGQEVYLGELPLMTDKGTFIINGTERVVVSQLQRSAGVFFDDDKGKTLASGKPLYSARIIPYRGSWVEFDFDANDLLHVRVDRRRKMYATAYLRAFWFLEKGAILSDEEILAQFYDVEEVLSFEDGNAWVRVHPEASVGAKVADDVKPPRHRESIVTAGKVLNAKLVEKLVEANVEKIPLRAEALVGRRTATRIVDTESGEVLVGTNTELTSTVLTQVMSRRVAPFKLLVLSAGKIDASLYETLARDHVKNPDEALVEIYRKLRPGDPPTVESARALFRGMFIDARRYDLARVGRFMINEKLGIEAPASTKTLRSEDIVFVIRHLLTVKLGSKPTDDIDHLGNRRVRSVGELLENQFRVGLTRMERAVKERMSISDITNLMPHDLINAKPVSAVVKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPRGLSRERAGFEVRDVHPTHYGRICPIETPEGPNIGLISSLSTYARTNEFGFIETPYRKVASGKVTDEIEFLTALKEEKFVIAQANAEIDRNGKFMQERVSARRAGEYRMVAPEELHYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLQPEAPLVGTGMEYIVARDSGSVVVAKRPGVVEYVSADRVVVRAESRSKKTDPVQDLPLDIFNLTKYRRSNQNTCINQKPIVRKGQRVAVGDVIADGPATDQGELALGRNVLVAFMPWGGYNFEDAILVSERLVKDDRFTSIHIEEFEVQARDTKLGKEEVTRDIPNVSEEALKDLDDSGIVRIGAKVKAGDILVGKITPKGETQLTPEEKLLRAIFGEKAGDVRDTSLTVPPGIEGTVVDVKVFSRRGVDKDERAKSIEEEEIGRLEKDYQDEIAMVEMERDQKLKNLLVGKTSLNELFDPTNKVRRVTKKSDRIERPDLDNFSWNELKKVKVKEDEGLAQMVKKIEELAEEQISIYDSMLEERIGRLRRGDDLPPGVIKMVKVYVAVKRKLSVGDKMAGRHGNKGVVSKILPEEDMPFLPDGTPVEIVLNPLGVPSRMNVGQILETHLGWAARALGLWVASPVFDGATEQEIKEHLKQAGMPTSGKTRLYDGRTGKPFHQEVTVGQIYILKLAHLVDDKMHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEMLTVKSDDVEGRNRIYEAIVKGENFLEPGTPESFNVLVKELQSLALDVELITKNGKKTS*