ggKbase home page

PLM4_65_coex_sep16_scaffold_539_5

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 2647..5406

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus secretin PilQ Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEZ9_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 945.0
  • Bit_score: 1310
  • Evalue 0.0
type IV pilus secretin PilQ similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 945.0
  • Bit_score: 1310
  • Evalue 0.0
Type IV pilus secretin PilQ {ECO:0000313|EMBL:ABQ26004.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 945.0
  • Bit_score: 1310
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2760
ATGAGAATGTATTCAAGCAGAATCATTTGCCATGCACTGATACTCATCTTTTTAATGGCTGTTTCTGGTTGTGCAAAGAGATTGGTCGCGGCAAAGGATGTTAACCAGTTTGATGCGGCCGGGGTTGCAGCTGTCCAAGAGATAAAAGTCAAGGATGACGCATCCCAGGTAGAAATCCTGACAAACCGGCCGTTAACTTATACCTCGTATAAGACGAGCGAACCGCCAAAAATCTTCATTGACCTCGCCCAGACCGAGCCAGGCATAGTAACTAATCCGTTGGAAGTCGCTTCCGGAAATATCAAAAGGGTAAGTTTGACTCGCCAGGATTTTGGCAGCGGTTTTTTGACCCGCATTGAAATTTCCCTGGTCAAGGACGTGGATTTCTCGGTAACCACAGATCCAGCAGATAGGGGGAAGTTGATCCTTGCCTTAATTAAACCGCAGAATAAAGAATCTTTGACCAAAGCCGAGGGTGACAAGCCGGCACAAGGAGAGGTAAAGGCGGAAGAAAAGGTAGTCAACGCACAGATAAAGGCGGAAGAACTACCCCCGGAAGTTAAACCTGAATCCAAAGAAGTGTCTCTGGTTAATGTTCAGCAAACCGATTCCACAGCAACTCCGACAAAGAATGAAACAAAGCAAGCCCAAAAGACCGAGACAGAGAAAAAGGCGGAAACTGCTCAACCGGTTAAGGCTATTAGTGCGATTACGCTTTTAAGCGATGCCATAGAAATTAGCGTAAATGGCGGGGTTGATACTTTCAACACCTTCAAGTTGACCAGGCCTGAGCGCCTGGTTCTGGATATCTTGGGCGCTAAGAGTTCAATTGCAGCAAACTCTGTCAACATTAACAGCCTTGGTATTGGAAAGGCGCGGATCGGCATAACGCCAGAGAAGGTGCGCATCGTTTTCGACGCTGCAAAAGAAAGGCTCCCTCACTACGAAGTGACAAAGACTGACAATGGCTTAAGGATACGTTTTACCGAACATCCCGCAGAGCCTGCTGAAAAGATTGTCAGTGAACCTCCCCGGGAAACTGCGAAACGCGCAACTGAAGCGAGGAAATCCGCGAAGGGTGGCAAGGGAGCCGTTGAGGCAATCGATTTTAAGGTTATGGACGGATACTCAAAGATATTTATAAAACTGGCGGGTAACTGTATCCCTGGCAAACCGGTGAAGACAGCGAAAGGTCTTTCGCTCACGATCAAGAACTGTCAGATTCCGCCCAAACTTCAGAGAGCGTTGGATACCAGAGCTTTTGCCAGCCCTGTCCAGAGTGTGACCCCCTACCAGGTCAAGGTTGCGGGTGTCACGGACACGAGAATAATGGTAAAGATGCGTGCGTCTGCCCCCTTTACCCTTAATCAGGATGGCGACACACTGCTATTGGAAATTAAGAATCCGGAAGAGCAGCAAACGCCGGCACTCATATCCGGAACGGTGAGGGAAAAAACAACGCCGGTTTCGTCTAAAATGGAAGAGGATCTCTTGGCGGCACCGGCAAAGGGAGCGGCTCCTGCCGAACTTTCAAATTATATCGTTTCCAGACCGTCAACGAAAAAAGTTTATAACGGCAGAAAAGTTACCCTTGAGTTTTCCGATGCCGATGTGAGAAAGATTTTCCAGCTTATTGCTGAGGTCAGTAATCTTAATTTCCTCATTGCCGATGATGTCACCGGTACAATCAGTATCAAACTGGTCAATGTGCCGTGGGACCAGGCACTGGATGTGATTCTTGACACCAAAGGCCTGGGGATGCAACGCGAAGGCAACATTGTCCAGATTAAGCCTAAGTCCAAGATGCAATCTCAGGCAGACGAAGATATTGCGGCTAAAAAAGCCCGTGAAAGGGGGATGGAGCTGCGCACCGAGGTGTTTGAGGTCAACTACGCCGCAGTGGGAGATGTGGTCACCCAGTTCAACGGCCTGAAAAGTGAACGGGGCAATGTAACATCAGATGCCCGCACTAATCGGGTCATTATAAAGGATATCGCTACGGCGATTGAAGATATGAGGTCGTTGCTGAAAAATCTCGATTCACCGGAAAAGCAGGTGATGATTGAAGCACGTATCGTCGAGGCGACTGCCAACTTTACCCGTGATCTTGGCGTGCAGTGGGGGCTTCATTACGCTGACGGATCGGCTTCCGTGGCCGGGATTAACAGACTCGACACCGGCTTTGGCGGTCAGGTTGCCGCTACTCCTCCCACTTCCGGCACATCCGGACCGGGCGCAGCAATTGGCATGTCGTTTGGCAAATTGACGAGTAATATACAGCTTGACCTGCGGTTATCGGCGGCAGCCACAGCAGATCAGATCAAGATCATCTCCACGCCGCGGGTGGTTACGCTCAACAATAAGGCGGCGAAGATTTCCCAGGGTCAGTCGATCCCCTACCAGACCACCTCTGCTGAAGGAACTAAAACGGAATTTATCGAGGCGGCCCTGACCCTTGAGGTAACGCCGCACATTACCGCCGACGGCAGCATCAGTATGAAGATCAAGGCTACCAACAACTCTGCAGGTACCGGATCACCACCTCCAATCAACAAAAAGGAAGCGACAACAGAACTGCTCGTGAAGAATGGTGAAACTACGGTAATCGGCGGTATTTATGTCGATGGTGAAACTGAGGCCGACACAGGGGTGCCCTTTCTTCAGGACATTCCACTACTCGGCTGGCTCTTCAAGTCCAACAAAACAACTAAAAATAAAAATGAACTGCTGATTTTCGTTACGCCGAAGATAGTCAGTTAA
PROTEIN sequence
Length: 920
MRMYSSRIICHALILIFLMAVSGCAKRLVAAKDVNQFDAAGVAAVQEIKVKDDASQVEILTNRPLTYTSYKTSEPPKIFIDLAQTEPGIVTNPLEVASGNIKRVSLTRQDFGSGFLTRIEISLVKDVDFSVTTDPADRGKLILALIKPQNKESLTKAEGDKPAQGEVKAEEKVVNAQIKAEELPPEVKPESKEVSLVNVQQTDSTATPTKNETKQAQKTETEKKAETAQPVKAISAITLLSDAIEISVNGGVDTFNTFKLTRPERLVLDILGAKSSIAANSVNINSLGIGKARIGITPEKVRIVFDAAKERLPHYEVTKTDNGLRIRFTEHPAEPAEKIVSEPPRETAKRATEARKSAKGGKGAVEAIDFKVMDGYSKIFIKLAGNCIPGKPVKTAKGLSLTIKNCQIPPKLQRALDTRAFASPVQSVTPYQVKVAGVTDTRIMVKMRASAPFTLNQDGDTLLLEIKNPEEQQTPALISGTVREKTTPVSSKMEEDLLAAPAKGAAPAELSNYIVSRPSTKKVYNGRKVTLEFSDADVRKIFQLIAEVSNLNFLIADDVTGTISIKLVNVPWDQALDVILDTKGLGMQREGNIVQIKPKSKMQSQADEDIAAKKARERGMELRTEVFEVNYAAVGDVVTQFNGLKSERGNVTSDARTNRVIIKDIATAIEDMRSLLKNLDSPEKQVMIEARIVEATANFTRDLGVQWGLHYADGSASVAGINRLDTGFGGQVAATPPTSGTSGPGAAIGMSFGKLTSNIQLDLRLSAAATADQIKIISTPRVVTLNNKAAKISQGQSIPYQTTSAEGTKTEFIEAALTLEVTPHITADGSISMKIKATNNSAGTGSPPPINKKEATTELLVKNGETTVIGGIYVDGETEADTGVPFLQDIPLLGWLFKSNKTTKNKNELLIFVTPKIVS*