ggKbase home page

PLM4_65_coex_sep16_scaffold_2651_16

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(16042..16797)

Top 3 Functional Annotations

Value Algorithm Source
tpiA; triosephosphate isomerase (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 251.0
  • Bit_score: 410
  • Evalue 2.20e-112
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 251.0
  • Bit_score: 410
  • Evalue 1.10e-111
Triosephosphate isomerase Tax=Geobacter uraniireducens (strain Rf4) RepID=TPIS_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 251.0
  • Bit_score: 410
  • Evalue 7.80e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGCGCAGACCTGTCATTGCCGGGAATTGGAAGCTGTATAAGACCGAGAGTGAATCACTTGAGCTGATCGGTGAACTCATTCCTCTCGTCAAAGATGCAGCTGGTGTCGAAATTGTGGTTGCTCCGGTCTTTACGGTTTTAAGTACGGTAAAAACCGCACTCAAAGGGACTAACGTCAAGCTTGCCGCCCAGGACTGTTTCTGGGAAGAACAGGGGGCATTTACCGGTGAAGTTTCCAGCACAATGCTTGTTGATGCCGGCTGCAGTCATGTGATTATCGGCCATTCAGAGAGGAGACAGTACTTTGGAGAAACCGATGAGACGGTAAACAGGAAAATTAAGGCGGCTTTGCAGGCCGGTCTGACGGTGCTGTTCTGCATCGGGGAAACTCTCTCCGAGCGGGAAGCCGAACAGACCTTTGCGGTTATCGAACGTCAGCTGACCGGCGGGCTTGCCGGTATCACAAAAGACGGTCTGAATTCCCTGATTATTGCCTATGAACCGGTCTGGGCGATCGGCACCGGCAAGACGGCTACGGACGCCCAGGCCCAGGCCGTCCATGCATTTATCCGTGGCGTTGCGGCGAAACTCTACGGAAATGAGGTTGCCGAAACCATCAGGATTCTCTATGGGGGCAGTGTGAAGCCTGAAAACATCAAAGGACTCATGGAGCAAAAGGATATTGATGGCGCTTTGGTCGGCGGCGCAAGTCTCAGAGCGGACTCATTTGCTCAAATAGTCCGTTATGGAGAATAA
PROTEIN sequence
Length: 252
MRRPVIAGNWKLYKTESESLELIGELIPLVKDAAGVEIVVAPVFTVLSTVKTALKGTNVKLAAQDCFWEEQGAFTGEVSSTMLVDAGCSHVIIGHSERRQYFGETDETVNRKIKAALQAGLTVLFCIGETLSEREAEQTFAVIERQLTGGLAGITKDGLNSLIIAYEPVWAIGTGKTATDAQAQAVHAFIRGVAAKLYGNEVAETIRILYGGSVKPENIKGLMEQKDIDGALVGGASLRADSFAQIVRYGE*