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PLM4_65_coex_sep16_scaffold_8174_8

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(3858..4394)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 177.0
  • Bit_score: 263
  • Evalue 1.20e-67
2'-5' RNA ligase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD45_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 177.0
  • Bit_score: 263
  • Evalue 8.40e-68
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 177.0
  • Bit_score: 263
  • Evalue 2.40e-68

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGTACAGACTGTTTGTGGCGATTGATCTGCCGGAAGAGGTAAAAAAAACAGTGGAGAACATTAGCGGCGAACTGCCGGGTGCGCACTGGGTGGCCGCTGACCAGCTCCATCTGACCCTCCGCTTTATCGGCGAGGTCGATGAAGGGCTGTTCCGGCAGATCAGGGAGGCCCTTGCCGGAGTTAGCGGCAATCCTTTTAGCTTAACCCTGAAGGGAATCGGCCATTTCCCCCCCGGCAAGCGCGCCAGGGTGCTCTGGGTGGGAATGGGGGAGAGCGAGGAACTGCTCAAGCTGCAAAAGAAGGTGGAACTGGCGCTGATAGATGCCGGCATTGCCCCGGAGGCGCGGCGATTTTCACCGCACATCACTATCGCCCGGATGAAGGAAACGCCAGCCGCCAGGGTACTCGCCTTTGAAGAAAAGCATGGGGGGTTCGAAACCCCGGCATTCCCCGTCGAGGTATTCTATCTCTATTCCAGCACCCTCAGCCGCGAAGGGGCCGTTCACAAACGGGAAGCAACCTATGCTTTCAGATGA
PROTEIN sequence
Length: 179
MYRLFVAIDLPEEVKKTVENISGELPGAHWVAADQLHLTLRFIGEVDEGLFRQIREALAGVSGNPFSLTLKGIGHFPPGKRARVLWVGMGESEELLKLQKKVELALIDAGIAPEARRFSPHITIARMKETPAARVLAFEEKHGGFETPAFPVEVFYLYSSTLSREGAVHKREATYAFR*