ggKbase home page

PLM4_65_coex_sep16_scaffold_5853

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5853_1
Tropheryma whipplei, Tropheryma, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..657
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Tropheryma whipplei RepID=Q83GU1_TROWT
Uncharacterized protein {ECO:0000313|EMBL:AAO44248.1}; species="Bacteria; Actinobacteria; Micrococcales; Tropheryma.;" source="Tropheryma whipplei (strain Twist) (Whipple's bacillus).;"
proline/alanine-rich repetetive membrane anchored protein
PLM4_65_coex_sep16_scaffold_5853_2
Sphingomonas sp. JE1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(661..2367)
DNA (1707bp) protein (569aa)
hypothetical protein Tax=Sphingomonas sp. Mn802worker RepID=UPI00035C574B
Putative hydrolase or acyltransferase (Alpha/beta hydrolase) {ECO:0000313|EMBL:AJW29447.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. JE1.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_5853_3
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2433..3377)
DNA (945bp) protein (315aa)
electron transfer flavoprotein subunit beta Tax=Arenimonas oryziterrae RepID=UPI0003B5A1F0
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KFN49403.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
etfA; electron transfer flavoprotein subunit alpha
PLM4_65_coex_sep16_scaffold_5853_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3377..4123)
DNA (747bp) protein (249aa)
electron transfer flavoprotein subunit beta Tax=Rudaea cellulosilytica RepID=UPI00035C94D4
EtfB protein {ECO:0000313|EMBL:AKC87229.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
etfB; electron transfer flavoprotein subunit beta
PLM4_65_coex_sep16_scaffold_5853_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4227..5051)
DNA (825bp) protein (275aa)
Transcriptional regulator MhpR protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IX97_RHOCS
mhpR; transcriptional regulator MhpR protein
Transcriptional regulator MhpR protein {ECO:0000313|EMBL:ACJ00921.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_coex_sep16_scaffold_5853_6
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5186..6412
DNA (1227bp) protein (409aa)
beta-lactamase Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484154
Beta-lactamase {ECO:0000313|EMBL:KIF17047.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
beta-lactamase
PLM4_65_coex_sep16_scaffold_5853_7
Cobetia marina, Cobetia, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7178..8116
DNA (939bp) protein (313aa)
ABC transporter Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AF124C
Oligopeptide transporter permease {ECO:0000313|EMBL:KGA00840.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Cobetia.;" source="Cobetia marina (Deleya marina).;"
binding-protein-dependent transport system inner membrane protein
PLM4_65_coex_sep16_scaffold_5853_8
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8113..8946
DNA (834bp) protein (278aa)
peptide ABC transporter permease Tax=Novispirillum itersonii RepID=UPI00036B85CB
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease components {ECO:0000313|EMBL:ABC27600.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
PLM4_65_coex_sep16_scaffold_5853_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8924..9913
DNA (990bp) protein (330aa)
Oligopeptide transport ATP-binding protein OppD Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWQ2_RHOCS
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY39259.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
oppD; oligopeptide transport ATP-binding protein OppD
PLM4_65_coex_sep16_scaffold_5853_10
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9876..10916
DNA (1041bp) protein (347aa)
Oligopeptide ABC transporter, ATP-binding protein OppF Tax=Burkholderia pseudomallei RepID=A3NNT5_BURP6
oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein
Oligopeptide ABC transporter, ATP-binding protein OppF {ECO:0000313|EMBL:EET04517.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei 1710a.;"
PLM4_65_coex_sep16_scaffold_5853_11
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10947..12170
DNA (1224bp) protein (408aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=Thauera sp. (strain MZ1T) RepID=C4ZIR2_THASP
Formyl-CoA transferase {ECO:0000313|EMBL:EZP41347.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
L-carnitine dehydratase/bile acid-inducible protein F
PLM4_65_coex_sep16_scaffold_5853_12

Not on your lists

12192..13463
DNA (1272bp) protein (424aa)
Aspartate aminotransferase (Fragment) Tax=mine drainage metagenome RepID=T1BCE9_9ZZZZ
Aspartate aminotransferase {ECO:0000313|EMBL:EQD50684.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
aminotransferase
Displaying 12 items

View Taxonomy