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PLM4_65_coex_sep16_scaffold_2016_4

Organism: PLM4_65_coex_sep16Gammaproteobacteria_66_10

near complete RP 47 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 9 / 38
Location: 3953..7195

Top 3 Functional Annotations

Value Algorithm Source
Spermidine synthase {ECO:0000313|EMBL:GAO55814.1}; EC=2.5.1.16 {ECO:0000313|EMBL:GAO55814.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 882.0
  • Bit_score: 446
  • Evalue 7.80e-122
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 795.0
  • Bit_score: 375
  • Evalue 9.20e-101
spermine synthase similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 796.0
  • Bit_score: 327
  • Evalue 8.10e-87

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3243
ATGTCAGCAGCTGGCTCGCCCGAGAACCACCCGAACCCCGCGAGCGACACCCCCTCTGAAACCGGGCCGAGCCTGTGGGTCCTGCTCGGCGTTGGCGCGTGCTTTGCACTCTCCGGGTTCGCAGCCCTGCTCTACCAGACTGCGTGGATGCGCCAGTTTTCGCTGGTCTTCGGCACTTCCGAGGTGGCAGTGGCGACAGTGCTCGCCGCGTACATGGGCGGGCTCGCGCTCGGTGCTCGAGTGGTCGAACGCTATCTCGACCGGGTCCGCCGCCCGGTGCTGGTTTACGGAGCTCTGGAGTTCGGTGTGGCGCTCGGCGCGCTGGCCGTGCCTGCATTGCTGATCGGCGCGGAGAGCTTGATGGTGGCGGCGATCGGCGATCAGCCCGCGCCCCCGGGCAGCGAGGGCTGGGCGCAAACCGCCTTCTATCTGCTCACCGCATTTGCCGTGCTGGTCCTGCCGACCGCGCTGATGGGCGCAACTCTGCCGCTGTTGACGCGGCACGTCGTGCGTACCGAAGCGCAGATCGGCGCGCGCACGGGTCTGCTCTACGCCATCAACACGCTCGGCGCCGTCGGCGGCGCGCTGGTCGCGGCCTTCTGGTTGCTACCGGACCTCGGTCTGCGCGGAACCGTCTACGTCGGTGCCGGCATCAACGTCGCTGTCTTCCTGATTGCAGCGCTGCTCTCGCGGTCGCAGCGTGCGCAGTCCCGGGCGGGCCTGCGCTCCGTGCCAGCCCAGCCCGGTTCCGCGCCTGCGATCCCGCCGCTGCGCGAGCGCCTCGGCTTCGGCCGTCACTGGATCCTGCCGGTGATGCTCGCATCCGGCGCGGTCTCCTTCGTCTACGAGGTGTTGTGGACACGGATGCTCAGCTTCGTGCTCGGCGGCAGCATCTATGCATTCGCCACCATGGTGGCGAGTTTCCTGCTCGGTATCGCCGCAGGCAGCGCCATCGCCTCGGCGCTGGCGCGCTCGCGCCGCATCGCGGAGGTGGCGTTCATTGTCACGCAGATCGCCATCGCGGGGTGCTCCATCGCCATCTACCTGGCGATCGATACGCTGGTCCCGGAGCACGCCGGCCTGCGCGGCAATGTGGCCATGGCGATCGTCGTGCTGCTCCCGGCGACGCTCTTCATCGGCGCGACTTTTCCATTGGCGGTGCGCATCCTGACAGACCAACCGCGCGCGGCTGCGGGTGCCGCGGCACGTATCTACGCGTGGAACACGGTCGGTGCGATCGCGGGCGCGCTGCTGGCGGGGTTCGTACTCATTCCCGAGCTGCGTTTCGAGGGTGCCATCCGCGTAGCCGTGTTCGGCAATGCGCTGCTCGCTCTGCTCACCTGCCTGGCGGTCGCGCGCGCACCGCTCGCCTGGAGCGCCGCCACGGCGTTGGTCTGCCTCGCAGTGGGGCTCGGTTTTCGCGCTCCCGCACCCGACCGGCTGCTGCGCGCCTCGCCCCTCAACGTCGGGTCCGCCGGCGTGTTGCGCTACTACGATGTGGGTCGATCGGCCACCGTCGTCGTCCTCGAACAGGACGGCACCCTGATGTTGCGCACCAACGGGCTGCCGGAGGCGTTGATCGACATTCCCGGCGCGGCGCCCCGCTTCAGCGGGGAATTCTGGCTCGCGCCGCTCGCCGTCATCGCCCGTCCCGGCGTCGAGTCGATGCTGGTCGTGGGTTACGGCGGCGGTATCGTCGTCGACGGCGTTCCGCCGTCCGTCAGGCGCGTCGACGTGATCGAGCTCGAGCCGAAGGTCATCGACGCCAACCGCGCCATACGCGAGCTGCGCGCCCGCGATCCGCTCGCGGACCGGCGCGTCAACCTCATCGTCAACGATGCACGCGGCGCCCTGGCCCTCACCGACAAGCGCTACGACGCGATCGTCTCGCAACCTTCGCATCCGTGGACCGCGGGCGCTTCGCATCTGTACACGCGCGAGTTCATGCAGCTGGCGCGCGCGCATCTCGCCGCAGGCGGCGTGTTCGTGCAGTGGATGAACGTCGCGTTCCTCGACGAGGAGCTGCTGCGCTCGCTGGCGGCCACGCTACTCGACGCATTCGGCCAGCTGCGCATCTATCGCCCGGATCCGAACACGCTGGTGTTCCTGGCTTCGACGCGGCCGCTGGATGTCGAGACGCAGCTCCTGCGTACGGGCGCGCCGCTCGTGTTCTCGCCGCGTCACTACGCACGCTTCGGCATTCACGTCCCCGAGGACGTGTTCACCGCCCTGGTCGCGGATCAGGAATCCGCGGTGGCGCTGGCACGCGGCGCCGAGCTGATCACCGACGATCGCAATCGCATGGCCACGGCCGGGGCATACGACCGCGGTGTCGGCCTCACCCCCGAGACCACCAGCCGGATCTTCGCGCAGTACGACCCGCTGCAGCAGCGCGGTGGCTGGGTGTTCCGCAACCCTGGCACGAGCCTGTCGTACGATTACGTGGCGCGCCGCATGGCGCTCTTCGCTTCCATCGATCCCGGTACGGCGGCGCGCATTCAGAGGATGGGACGCGCGATCGAGGAACCCTCCACCGCCGCCTACGTCATGGCCATCGCCCACAGCGTTGGCGGCGATCCGCGCGGCTCGACCCGCCTGCTCGAAGAATCGCTCGGTCTCGACCCGCTCAACGGCGCGGCGCGTTTCGAGCTCGTGCGTCCGTGGCTGTACGCACTGGCGCAGAATCGCGCTCCGGAACCGGCGCGCGTGCTGGCGCGCGGACTGCAAGGATCCGCGGCTGCCCTGATCGAAGCGGGTCGGCATGCGGGAGCTGGCGACTGGGCCGAGCTTCCGCCACTCGATGCCGTGCTGCAGAGCGCCCGCTGGACCGACGCCTGGTACTTCGAGACTGTGCAGATCCGGGCCGAGTGGCGCACGCGCGTGAGTAATCCGGACAGGCGTGCGCGTCTCGGGCGCGAAGCGCTTGCCCTCCTCGACGATGCGATGATCGTTCAGCCGACGCCGGCGATGCACTCGCTGCGCGCGCGGGCCGCGATCGCCGCGGACCGGCCGGAAGTGCTGGTGGAATCGATCTACAGGTTTTCGCGGGGAACGCTCAACGACGCGGCGCACGCCGGCGAGCAGGCACTGCCGCAGATGCGCGGCAGTATCGACACGCTGATCAAGTTGATCGACGGACTCGGCGACGATCCGCGCGTGCGCAAGGAACGGCGCGATGAGGTTCGGGCGCACCTGGGCAAGACGCGCGAGGAGATCATGGCGAAGGCGGCGGCGCAGTCCTGA
PROTEIN sequence
Length: 1081
MSAAGSPENHPNPASDTPSETGPSLWVLLGVGACFALSGFAALLYQTAWMRQFSLVFGTSEVAVATVLAAYMGGLALGARVVERYLDRVRRPVLVYGALEFGVALGALAVPALLIGAESLMVAAIGDQPAPPGSEGWAQTAFYLLTAFAVLVLPTALMGATLPLLTRHVVRTEAQIGARTGLLYAINTLGAVGGALVAAFWLLPDLGLRGTVYVGAGINVAVFLIAALLSRSQRAQSRAGLRSVPAQPGSAPAIPPLRERLGFGRHWILPVMLASGAVSFVYEVLWTRMLSFVLGGSIYAFATMVASFLLGIAAGSAIASALARSRRIAEVAFIVTQIAIAGCSIAIYLAIDTLVPEHAGLRGNVAMAIVVLLPATLFIGATFPLAVRILTDQPRAAAGAAARIYAWNTVGAIAGALLAGFVLIPELRFEGAIRVAVFGNALLALLTCLAVARAPLAWSAATALVCLAVGLGFRAPAPDRLLRASPLNVGSAGVLRYYDVGRSATVVVLEQDGTLMLRTNGLPEALIDIPGAAPRFSGEFWLAPLAVIARPGVESMLVVGYGGGIVVDGVPPSVRRVDVIELEPKVIDANRAIRELRARDPLADRRVNLIVNDARGALALTDKRYDAIVSQPSHPWTAGASHLYTREFMQLARAHLAAGGVFVQWMNVAFLDEELLRSLAATLLDAFGQLRIYRPDPNTLVFLASTRPLDVETQLLRTGAPLVFSPRHYARFGIHVPEDVFTALVADQESAVALARGAELITDDRNRMATAGAYDRGVGLTPETTSRIFAQYDPLQQRGGWVFRNPGTSLSYDYVARRMALFASIDPGTAARIQRMGRAIEEPSTAAYVMAIAHSVGGDPRGSTRLLEESLGLDPLNGAARFELVRPWLYALAQNRAPEPARVLARGLQGSAAALIEAGRHAGAGDWAELPPLDAVLQSARWTDAWYFETVQIRAEWRTRVSNPDRRARLGREALALLDDAMIVQPTPAMHSLRARAAIAADRPEVLVESIYRFSRGTLNDAAHAGEQALPQMRGSIDTLIKLIDGLGDDPRVRKERRDEVRAHLGKTREEIMAKAAAQS*