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PLM1_60_coex_sep16_scaffold_967

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_967_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)
Fosmidomycin resistance protein bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily MFS_1
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_967_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(332..805)
DNA (474bp) protein (158aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_60_coex_sep16_scaffold_967_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(802..2208)
DNA (1407bp) protein (469aa)
Putative MATE efflux family protein Tax=Variovorax paradoxus B4 RepID=T1XEG3_VARPD
putative MATE efflux family protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_60_coex_sep16_scaffold_967_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2208..2645)
DNA (438bp) protein (146aa)
hypothetical protein bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_coex_sep16_scaffold_967_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2706..3164
DNA (459bp) protein (153aa)
Transcriptional regulator, HxlR family Tax=Geobacillus RepID=E3IGU0_GEOS0
HxlR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_coex_sep16_scaffold_967_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3118..3933)
DNA (816bp) protein (272aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. WSM471 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_60_coex_sep16_scaffold_967_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3974..6073
DNA (2100bp) protein (700aa)
Indolepyruvate ferredoxin oxidoreductase, alpha subunit bin=GWA2_Methylomirabilis_73_35 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
indolepyruvate ferredoxin oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_60_coex_sep16_scaffold_967_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6073..7617
DNA (1545bp) protein (515aa)
Putative indolepyruvate oxidoreductase subunit B bin=GWC2_Methylomirabilis_70_24 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PorG, Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_967_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7640..8362
DNA (723bp) protein (241aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA dehydratase EchA8_3 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium sp. genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_967_10
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8325..8687)
DNA (363bp) protein (121aa)
Transcriptional regulator, HxlR family Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVT0_PARL1
HxlR family transcriptional regulator {ECO:0000313|EMBL:GAK46677.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
HxlR family transcriptional regulator
PLM1_60_coex_sep16_scaffold_967_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8776..9387
DNA (612bp) protein (204aa)
Carboxymuconolactone decarboxylase Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVT1_PARL1
carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ABS64014.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM1_60_coex_sep16_scaffold_967_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9281..10573)
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_967_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10621..11286)
DNA (666bp) protein (222aa)
Coenzyme A transferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH88_9CHLR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 13 items

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