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PLM1_60_coex_sep16_scaffold_6350

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_6350_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(29..688)
DNA (660bp) protein (220aa)
2-phospho-L-lactate guanylyltransferase bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6350_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(685..1611)
DNA (927bp) protein (309aa)
2-phospho-L-lactate transferase bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LPPG:FO 2-phospho-L-lactate transferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6350_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1630..2136)
DNA (507bp) protein (169aa)
id=2615056 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6350_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2123..2410)
DNA (288bp) protein (96aa)
Transcriptional dual regulator HU-beta bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hupB; transcriptional dual regulator HU-beta
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6350_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2561..3841)
DNA (1281bp) protein (427aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-)
FO synthase subunit 2 bin=GWF2_Methylomirabilis_70_14 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6350_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3841..4977)
DNA (1137bp) protein (379aa)
FO synthase subunit 1 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cofG; FO synthase subunit 1
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6350_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4959..5408)
DNA (450bp) protein (150aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6350_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5416..6390)
DNA (975bp) protein (325aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases bin=GWF2_Methylomirabilis_70_14 species=uncultured Chloroflexi bacterium HF0200_06I16 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_6350_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6667..8022
DNA (1356bp) protein (452aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWF2_Methylomirabilis_70_14 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two component sigma54 specific Fis family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6350_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8691..9029
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II bin=GWF2_Methylomirabilis_70_14 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrogen regulatory protein PII
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6350_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9050..9844
DNA (795bp) protein (265aa)
Ammonium transport protein (Amt family) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amtB; ammonium transport protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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