ggKbase home page

PLM1_60_coex_sep16_scaffold_3860

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_3860_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


1..870
-----------------
DNA (870bp)
protein (290aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3860_2
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

872..1666
-----------------
DNA (795bp)
protein (265aa)
Sporulation domain-containing protein Tax=Geobacter sp. (strain M18) RepID=E8WIA9_GEOS8
sporulation domain-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:ADW13410.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM1_60_coex_sep16_scaffold_3860_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1677..2261
-----------------
DNA (585bp)
protein (195aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3860_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2315..4123
-----------------
DNA (1809bp)
protein (603aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3860_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4322..5173
-----------------
DNA (852bp)
protein (284aa)
Dihydropteroate synthase bin=GWC2_Methylomirabilis_70_16 species=Thermogladius cellulolyticus genus=Thermogladius taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dihydropteroate synthase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3860_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5180..5896
-----------------
DNA (717bp)
protein (239aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3860_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5897..6274
-----------------
DNA (378bp)
protein (126aa)
YbbR family protein bin=GWC2_Methylomirabilis_70_16 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3860_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6271..7620
-----------------
DNA (1350bp)
protein (450aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3860_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7617..8030
-----------------
DNA (414bp)
protein (138aa)
Holo-[acyl-carrier-protein] synthase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
holo-acyl-carrier-protein synthase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3860_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8035..8802
-----------------
DNA (768bp)
protein (256aa)
id=4870785 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3860_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8808..10097
-----------------
DNA (1290bp)
protein (430aa)
Putative uncharacterized protein yjeF bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yjeF; carbohydrate kinase
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 11 items

View Taxonomy