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PLM1_60_coex_sep16_scaffold_711_11

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(9635..12694)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 874.0
  • Bit_score: 794
  • Evalue 2.90e-227
Transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 1021.0
  • Bit_score: 1476
  • Evalue 0.0
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 1021.0
  • Bit_score: 1476
  • Evalue 0.0

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3060
ATGGCGCAGGATGCCGCCTTCTTCGTGTCCTCGCTCTCGGGTGGCCCCGCGGTGGGCGGTGACGACGGCGAGGACAGCCGCGTGCTCGAGTTCCCGTCGGGCACCGGTGCCTCCTGGCGCGGCACCCGCCATCGCGAGCCCGACGCCGAGCGCGCGCTGTGCTGCCGCCGCCTGCTCGACGGCGACGCGGTGGTGATCGTGGCCACGCCCTCCGGGCTCTCGGAGCCGGTGCCGCCGCCCTCCGCCTTCAAGCGGCGCACGTTCAGTTTGATGGTCGGGGAGAGCAGCGACCGCGAGATCCTGCTCGAGCTGCTCGAGGCGGCCGGGTACGAGCGCGTCGAGACCGTGATGGAGGTCGGGCAGTGGAGCGTGCGCGGCGGCATCGTGGACATCTTCTCGCCCACCCACGAGCGGCCGGTGCGTGCCGAGTTCGTCGGCGACGAGGTGGAGTCCCTCCGCGTCTTCGATCCCACCACCCAGCGCTCGATCGCGCCGCTCCGCGAGCTGACGGTGCTGCCGCTCGGCTCGAAGGACGCGGCGCCGGTCACCCTGGCGGACTACCTGCCGCCCGGGACCCTGGTGGTGCTCGAGGATCCCGCCATGCTGGAGGCGCCGCCGGACGACGCGCCCTCGGCGGCCCCGCTCGCCTCCGTGCTCGAGCGCTTCCAGCGGGTCGAGCTGCCGCTGCTCCAGCGCAGCGAGGGCGCGGCGCCCCGCGTCCCGATGGGCACCCGATCGATCGGCGGCTACCGCGGCCAGTTCAAGGCGCTGGCCGGCGAGATCCGCACCTGGCGGGGCGAGGGCTTCACGGTGCGCCTGGTGGTCGATGACGAGCGGCAGAGCCAGCGGCTGCGTCAGATGCTGGCCGAGCATGATCTCGAGCCGTGGCCCGAGGGGACCCTCTGGAGCCAGGAAGGGCTCGCGGTGGTGGTGGGCGAGTGCGGGGCGGGCTTCCAGATCCCGGCGCTCGGCCTCATCGTGCTCTGCGAGGAGGAGATCTTCGGGGCCCAGCGTCGCCGCCTCCGGCGCCCGCTCTTCCAGCGCGGCGCGGCCATCGCTTCGTTCAACGACCTGGCCTCCAACGACCTGGTGGTGCACGAGCAGCACGGCATCGGCCGCTACCACGGCCTCCGCACCCTGTCCTCCGAGGGGCACGACGCCGACTTCCTGCTGCTGGAGTACGCCGACGGCGGCCGGCTCTACCTGCCCGTCGAGCGGCTCGACCTGATCTCCAAGTACATGGGCGCGCCCGAGGGCTCGGCGCGGCTCGACCGACTCGGGGGCGGCGCGTGGCAGCGCCTGAAGGAATCGGTGCGGGCCGCGCTGCGCGACATGGCGGAGGCCCTGCTCAAGCTCTACGCCACCCGCTCGGTCGCCGAGCGGCCGCACTTCTCGGACGACACGCCCTGGCAGGGCGAGTTCGAAGCCGCCTTCCGCTTCGAGGAGACGCCGGACCAGCTCCGGGCCATCGAGGAAGTGAAGACCGACATGGTGGGCGGCCGCCCGATGGACCGCCTGGTGGCGGGCGACGTCGGCTACGGCAAGACCGAGGTCGCGCTCCGCGCGGCCTTCAAAGCGGTGGCGGACGGCCGGCAGGTGGCGGTGCTCGTGCCCACCACCGTGCTGGCCCAGCAGCACTTCAACACGTTCGTGGAGCGCTTCGGCCCGTTCCCGGCGCGGGTCGAGCTGCTCTCGCGCTTCCGCAGCCCGAAGGAGCAGAAGCAGGTGGTGGCGGGGCTCGCCGCCGGCGCGGTGGACGTGGTGGTGGGCACGCACCGGCTCCTGTCCAAGGACGTGTCGTTCAAGAACCTCGGGCTCCTGGTGGTGGACGAGGAGCACCGCTTCGGCGTCTCCCACAAGGAGCGGCTCAAGCAGCTCCGCACCTCGGTGGACGTGTTGACGCTCACCGCCACCCCGATCCCGCGCACGCTCCACATGGCGCTCTCCGGGGTGCGCGACCTCTCGGTGATCGAGACGCCGCCGCTCGACCGGCTGCCGGTGGAGACGGTGGTCACCGCGTTCAGCCGCACCGTCATCAAGGAGGCGATCGAGCGGGAGCTGAACCGGGGCGGGCAGGTCTTCTTCGTCCACAATCGCATCCAGTCGCTCGCCTCCATGACCACCTTCATCAAGAGCCTGGTCCCGGAGGCCCGGGTGGTGATGGGGCACGGCCAGATGGCGGAGCGGGAGCTGGAGAGCGTGATGGTCAAGTTCGTGGACGGCCAGGCCGACGTGCTGGTCTCGACATCCATCGTGGAATCGGGCCTGGACATCCCGGCCTCGAACACGATAATCATCAATCGGGCCGACCGTTTCGGCCTGGCCCAGCTCTACCAGCTCCGGGGCCGGGTAGGGCGGGAGCGGCAGCAGGCCTACGCCTACCTCATGGTGCCCGCCGACGGGCGGGTGGACGAGACCGCCCAGCGGCGGCTGCGGGTGATCGAGGAGTCCACCGAGCTGGGGGCGGGGCTCCGGCTGGCCATGCGGGATCTGGAGATCCGGGGCACCGGCAACCTGCTGGGGGCGGCCCAGCACGGGCACATCGCCGCCGTCGGATTCGATCTTTACAGCAAGCTCCTCGCGGAGGCCGTGAGAGAATTGAAGGGCGAACCGGCGACCGAGCGTGTCGACCCGGTGATCTCGGCGGACGTGGAAGCGCTCCTGCCCGAGGCGTACGTTCCCGAGGTGAATCAGCGCCTGGCGCTCTACAAGCGGCTGGCCGAGATCGAGCGGTCCGAGGACGTCGCCGATGCGCGCGCGGAGCTGACCGATCGCTACGGCCCGCCGCCGCCCGCGGTGGAGGGGCTGCTGGACGTGGTGGGGCTCCGGGTGGCCGCCCGGGCGCTCGGCCTCGAGCGGGTGGAGGCGGGCGGCGGACGCGCGGTCCTGACCTTCGCGGCATCGACCCCGGTCACGCCGGAACGGATGCTCAAGACGATCGCGGCCAGCCGCGGCGCTCTGAAACTCAGAAAGGAGTACACGGTGGAAGCGCGGATCCCTGCCGAACCCTGGCCCGCGGTGCGCGACGCCCTCGCGAAGCTCCTGGATTCCCTCCGATGA
PROTEIN sequence
Length: 1020
MAQDAAFFVSSLSGGPAVGGDDGEDSRVLEFPSGTGASWRGTRHREPDAERALCCRRLLDGDAVVIVATPSGLSEPVPPPSAFKRRTFSLMVGESSDREILLELLEAAGYERVETVMEVGQWSVRGGIVDIFSPTHERPVRAEFVGDEVESLRVFDPTTQRSIAPLRELTVLPLGSKDAAPVTLADYLPPGTLVVLEDPAMLEAPPDDAPSAAPLASVLERFQRVELPLLQRSEGAAPRVPMGTRSIGGYRGQFKALAGEIRTWRGEGFTVRLVVDDERQSQRLRQMLAEHDLEPWPEGTLWSQEGLAVVVGECGAGFQIPALGLIVLCEEEIFGAQRRRLRRPLFQRGAAIASFNDLASNDLVVHEQHGIGRYHGLRTLSSEGHDADFLLLEYADGGRLYLPVERLDLISKYMGAPEGSARLDRLGGGAWQRLKESVRAALRDMAEALLKLYATRSVAERPHFSDDTPWQGEFEAAFRFEETPDQLRAIEEVKTDMVGGRPMDRLVAGDVGYGKTEVALRAAFKAVADGRQVAVLVPTTVLAQQHFNTFVERFGPFPARVELLSRFRSPKEQKQVVAGLAAGAVDVVVGTHRLLSKDVSFKNLGLLVVDEEHRFGVSHKERLKQLRTSVDVLTLTATPIPRTLHMALSGVRDLSVIETPPLDRLPVETVVTAFSRTVIKEAIERELNRGGQVFFVHNRIQSLASMTTFIKSLVPEARVVMGHGQMAERELESVMVKFVDGQADVLVSTSIVESGLDIPASNTIIINRADRFGLAQLYQLRGRVGRERQQAYAYLMVPADGRVDETAQRRLRVIEESTELGAGLRLAMRDLEIRGTGNLLGAAQHGHIAAVGFDLYSKLLAEAVRELKGEPATERVDPVISADVEALLPEAYVPEVNQRLALYKRLAEIERSEDVADARAELTDRYGPPPPAVEGLLDVVGLRVAARALGLERVEAGGGRAVLTFAASTPVTPERMLKTIAASRGALKLRKEYTVEARIPAEPWPAVRDALAKLLDSLR*