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PLM3-1_170_b2_sep16_scaffold_1306_1

Organism: PLM6_170_b2_sep16_Eisenbacteria_67_7

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 603..1472

Top 3 Functional Annotations

Value Algorithm Source
LuxR family two component transcriptional regulator bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Brachybacterium squillarum genus=Brachybacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 174.0
  • Bit_score: 134
  • Evalue 9.50e-29
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 192.0
  • Bit_score: 74
  • Evalue 4.30e-11
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 174.0
  • Bit_score: 134
  • Evalue 1.30e-28

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 870
ATGTGGGACTCAGGCTCTAGGAGCGCTGCAGGGAAGCGCGGCACCACCGGGAACTCCAGCGGCCGGAGCGAACCCAAGCGTGGGGGTCCGGCCCGGCGGCGGAAACTGCCCCCCGCCGGGAAGCGCTCCACGGGGAGCAAGATTCGCATCCTCCTCGCGGACGACCAGCCGATTGACCGCGGGGGCATGTCCGCCCTCCTCCAGTCCCAACCCGACTTCGAAGTCGTGGCCCAGGCGAGCAGTGCCGACGAGGCGGCCAAGCGCTGCCGCGATCTCCTGCCCTCGCTCGCGATTCTCGCGCTCCGACTCCGCGCGCCCGCAGGCTCGACGGCGCTCGAGATCATCCGGTCGGCCGCGTCCGAGATACCCATACTCGCGGTCGCGGAGCGGGGCGAGGGGCACTGCATGGTGCTGAATCCTCCCCGGTCAGCGAGCCTCGCCGTGGCGGGCTCCCCGTCGAACGGTTGCGCGACGGGGACCGATTGCCTCCAGCTCGCCGTGGTGCAGGGCGCCACAGGGACGATCCGCCGGAGCGCGGAGCCCGATGAGCTGTTCCGCGCCGTTCGCACCGTGGCGTCGGGCAAGGCATGGTACGAGTCGGCACGCGCTCGCGCGCCCGGGGGACGATGGACACCCTTCGCTCTCCGACCGCGAGACGGAAGTTGCCGAGTTGATCGCCAACGGGCGCTCCAACAAGGAAATCGCGCAGGCATTGGAGATCAGCGAGCCCACAGTAAAGAAGCACGTCGGTCACGTCCTCGGAAAACTCAAGCTTCAAGATCGGCTTCAGATCGGACTTTACGTGGCGCGCAACCCGTTGGTGCTTCGCCGTCCCGAGCGTGCGCGGCCGTAGTCTCCTCGTATACCTAG
PROTEIN sequence
Length: 290
MWDSGSRSAAGKRGTTGNSSGRSEPKRGGPARRRKLPPAGKRSTGSKIRILLADDQPIDRGGMSALLQSQPDFEVVAQASSADEAAKRCRDLLPSLAILALRLRAPAGSTALEIIRSAASEIPILAVAERGEGHCMVLNPPRSASLAVAGSPSNGCATGTDCLQLAVVQGATGTIRRSAEPDELFRAVRTVASGKAWYESARARAPGGRWTPFALRPRDGSCRVDRQRALQQGNRAGIGDQRAHSKEARRSRPRKTQASRSASDRTLRGAQPVGASPSRACAAVVSSYT*