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PLM3-1_170_b2_sep16_scaffold_3905_13

Organism: PLM6_170_b2_sep16_Eisenbacteria_67_7

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 9086..9856

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG Tax=Magnetococcus sp. (strain MC-1) RepID=A0LC35_MAGSM bin=16ft_combo_ws3_JS1 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 250.0
  • Bit_score: 251
  • Evalue 6.20e-64
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 240.0
  • Bit_score: 224
  • Evalue 1.80e-56
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 250.0
  • Bit_score: 251
  • Evalue 8.70e-64

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 771
ATGGCTTCATTGTCCGTTCTACACACGCTCCAGAACAGGCCGGCCCGCTCGCGTAACCGCAAGGAGCGCCAGAAGGAAGTCGCGCTCAGCAAGTACGCTCCGCTGGTCAAGTACGTCGTGGATCGCCTCGCGCTGCACCTGCCGAAATCGGTGGAGCGCGACGACCTGATTTCCGCGGCGGTGATCGGACTCTTCGACGCGCTCGAGAAATACGACGCGACGAAGGGAACGAAATTCGAGACCTACGCCATCTGGCGGATCCGAGGCGCGATCCTGGACGAGCTGAGATCCCTCGACTGGGCCTCGCGCTCGATACGGCGCAAGGCGCGAAACGTCGAGGAGGTCGCCCGAGACCTGGGCCAGAAGCTCGGCCGCGCGGCGACCGAGGAGGAGGTGGCCGAGGCGCTGAACCTGAGCCCGGTCGAGCTGTCGCGGCTGATGGACGAGGTCCACGGCACCGCGCTCCTCTCGCTCTCCAAGTCGGTTTCCTCGGACGAGGAGCAGGATTTCATCCAGCTCGAGGACATCGTCGACGACCCCTCGCACCGCGACGCGCTGGAACTGCTCGAGACCGAGGAGGCGCGTGAAGTGCTGCTCGAGACGATCGACAACCTCCCCGAGCAGCAGCGGCTCGTCGTGGCCCTCTACTACTACGAGGAGATGACGCTCAAGGAAATCGGCGAGGCGCTCCACATCTCGGAATCGCGCGTGTCCCAGATCCACACCCGGGCGGTGAAGACGCTCAGGGCCCGTCTCGGCCGGATGATCTGA
PROTEIN sequence
Length: 257
MASLSVLHTLQNRPARSRNRKERQKEVALSKYAPLVKYVVDRLALHLPKSVERDDLISAAVIGLFDALEKYDATKGTKFETYAIWRIRGAILDELRSLDWASRSIRRKARNVEEVARDLGQKLGRAATEEEVAEALNLSPVELSRLMDEVHGTALLSLSKSVSSDEEQDFIQLEDIVDDPSHRDALELLETEEAREVLLETIDNLPEQQRLVVALYYYEEMTLKEIGEALHISESRVSQIHTRAVKTLRARLGRMI*