ggKbase home page

PLM3-1_170_b2_sep16_scaffold_3905_16

Organism: PLM6_170_b2_sep16_Eisenbacteria_67_7

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 11135..12331

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S01H4_C00100 {ECO:0000313|EMBL:GAG64369.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 368.0
  • Bit_score: 169
  • Evalue 6.80e-39
multi-sensor signal transduction histidine kinase bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 391.0
  • Bit_score: 161
  • Evalue 1.70e-36
GAF sensor-containing diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 28.4
  • Coverage: 320.0
  • Bit_score: 154
  • Evalue 4.50e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 1197
ATGAAGCAGCGGAATGGAGCAGGCTCGAAGCGGCTCGTGGAGGCGACCGAGCGGTTCATCCGGTCCGAGCAGAAGCTGCTCGAGGTGCTGGGGAGCCGGCGCATCCTCAAGAAGTCGGAGTGCGACCACTTTGCGAAGGATCTCTCCCTCTCGGCCGCGAAGAAGCGCTCTTCGGACGTGTTCGCGAGCGCGATCTCGATCAATCGCAAGCTGATGGGGATCCTCTCCAAGTCCCGCGCCGCCGGCGCGAAGCAGACGACCGACGCCGACGTGCTGGCCGCGATCGGGGAGACGGTGCAGAATACCGCCGATCCGATCCAAGCGTTCCGCGACTCGCTGATCCACATTCGCGGCGCGATTCCGTTCGAGAACGCCACGCTGTTCGTGCTCGACCCGGACAAGCAAAGCCTCGTCGAAGCGGTCTCGATCGGCGAGCGCGTCGATCTGATCGGCCACGTCCGCTTCGGCGGCGGCCGGGGATTCTCCTCTTGGGTGGCCCAGCAGCGCCGGCCGGTCCTCTTGAACGACCTCCATCGGGACGGCGGCGCCGACAGCGTGTCCCTCCGCTCCTTCGTCTCGGTTCCCATTCTGGTCCAGGACGACGTGGTCGGCGTGATCAACCTGAGCCACTCGCGTCCCGGCGCCTTCGACGAGGAGTGCGCCCGGCGCGTCGGCCTCATGGCGCTGCCGATCTCGGCCATCGCGATCCGGGTGCTCCTCCAGCGCGAGCGGGAGCGGCTGACCACGACCGACGACTTGACCACGCTCTATAACCGGCGCCACTTCGACCGGCACCTCGAGGAGGAGGTCGGAAAGGCGAAGCGCTACGGCCACAAGGTCTCGGTCGTGGTGTTCGACGTCGACGAGACCAAGGCGGGGTCGCGCCGGAGCAAGAACACCGTCGGAGACCAGCTCCTCTCCGACATGGGCCGTCTGCTCAAGCGGTCGGCGCGCGAAACCGACTGCGTCGCCCGGTACGGGGGTGAGGAGTTCCGAATCCTGCTTCCGCACACCGACGCGCCCGAGGCGAAGGTGGCGGCGGAGCGTCTTCGCGGGGTCGTGGAGCGCCACGCGTTCCCGAGGCGAAAGAAGCTCACGATCCACATCGGGGTGGCCACCTATCCGGCTGACGCGAGCGATTCGGGCTCACTGAATGTCCGCGCCCACTCGGCGCTCTCGGAGGCCAAGCAGGGGTGA
PROTEIN sequence
Length: 399
MKQRNGAGSKRLVEATERFIRSEQKLLEVLGSRRILKKSECDHFAKDLSLSAAKKRSSDVFASAISINRKLMGILSKSRAAGAKQTTDADVLAAIGETVQNTADPIQAFRDSLIHIRGAIPFENATLFVLDPDKQSLVEAVSIGERVDLIGHVRFGGGRGFSSWVAQQRRPVLLNDLHRDGGADSVSLRSFVSVPILVQDDVVGVINLSHSRPGAFDEECARRVGLMALPISAIAIRVLLQRERERLTTTDDLTTLYNRRHFDRHLEEEVGKAKRYGHKVSVVVFDVDETKAGSRRSKNTVGDQLLSDMGRLLKRSARETDCVARYGGEEFRILLPHTDAPEAKVAAERLRGVVERHAFPRRKKLTIHIGVATYPADASDSGSLNVRAHSALSEAKQG*