name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
anamox1_curated_scaffold_769_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3..551
----------------- DNA (549bp) protein (183aa) |
Putative serine protein kinase, PrkA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK71_RUBGI
prkA; putative serine protein kinase PrkA
Putative serine protein kinase, PrkA {ECO:0000313|EMBL:BAL93408.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_769_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
562..1851
----------------- DNA (1290bp) protein (430aa) |
UPF0229 protein RGE_00640 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK72_RUBGI
hypothetical protein
UPF0229 protein RGE_00640 {ECO:0000256|HAMAP-Rule:MF_01232}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_769_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1877..3436
----------------- DNA (1560bp) protein (520aa) |
SpoVR family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK73_RUBGI
SpoVR family protein
SpoVR family protein {ECO:0000313|EMBL:BAL93410.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_769_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3822..4502
----------------- DNA (681bp) protein (227aa) |
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNK9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09927.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
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anamox1_curated_scaffold_769_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4588..6003)
----------------- DNA (1416bp) protein (472aa) |
D-lactate dehydrogenase Tax=Caldimonas manganoxidans RepID=UPI0003800EA0
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EHR68960.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dld; D-lactate dehydrogenase (cytochrome)
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anamox1_curated_scaffold_769_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6136..6720
----------------- DNA (585bp) protein (195aa) |
ATP:cob(I)alamin adenosyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT28_9BURK
ATP--cobalamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EHR68962.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
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anamox1_curated_scaffold_769_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6790..7929)
----------------- DNA (1140bp) protein (380aa) |
aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase AroG (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK76_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
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anamox1_curated_scaffold_769_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8184..9410)
----------------- DNA (1227bp) protein (409aa) |
threonine dehydratase (EC:4.3.1.19)
L-threonine ammonia-lyase {ECO:0000313|EMBL:ABM96723.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ABM96723.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
L-threonine ammonia-lyase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SMD4_METPP
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anamox1_curated_scaffold_769_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9407..10873)
----------------- DNA (1467bp) protein (489aa) |
peptidase C69 Tax=Caldimonas manganoxidans RepID=UPI000370DCD8
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:EHR68971.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
tldD; protein TldD
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anamox1_curated_scaffold_769_10
unknown
|
Not on your lists |
11094..11345
----------------- DNA (252bp) protein (84aa) |
This feature has no annotations |
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anamox1_curated_scaffold_769_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11355..12191)
----------------- DNA (837bp) protein (279aa) |
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Putative S-adenosylmethionine-dependent methyltransferase, YraL family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT99_9BURK
tetrapyrrole methylase family protein
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anamox1_curated_scaffold_769_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12268..12654
----------------- DNA (387bp) protein (129aa) |
UPF0102 protein RGE_00730 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK81_RUBGI
hypothetical protein
UPF0102 protein RGE_00730 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_769_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12726..13268
----------------- DNA (543bp) protein (181aa) |
gmhA; phosphoheptose isomerase (EC:5.3.1.-)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003691BE9
Phosphoheptose isomerase {ECO:0000313|EMBL:EHR68974.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
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anamox1_curated_scaffold_769_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13265..13888
----------------- DNA (624bp) protein (208aa) |
Transport protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW4_9BURK
Transport protein {ECO:0000313|EMBL:EGJ09682.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
transport-associated protein
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anamox1_curated_scaffold_769_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14069..14968)
----------------- DNA (900bp) protein (300aa) |
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTA3_9BURK
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EHR68976.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
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anamox1_curated_scaffold_769_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15007..16209)
----------------- DNA (1203bp) protein (401aa) |
Twitching motility protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW6_9BURK
Twitching motility protein {ECO:0000313|EMBL:EGJ09684.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilU; twitching motility protein PilU
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anamox1_curated_scaffold_769_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16218..17267)
----------------- DNA (1050bp) protein (350aa) |
Twitching motility protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW8_9BURK
Twitching motility protein {ECO:0000313|EMBL:EGJ09686.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilT; twitching motility protein PilT
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anamox1_curated_scaffold_769_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17336..18043
----------------- DNA (708bp) protein (236aa) |
Alanine racemase domain protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW9_9BURK
Alanine racemase domain protein {ECO:0000313|EMBL:EGJ09687.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
alanine racemase domain-containing protein
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anamox1_curated_scaffold_769_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(18069..18935)
----------------- DNA (867bp) protein (289aa) |
Thioredoxin Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMX3_9BURK
thioredoxin domain-containing protein
Thioredoxin {ECO:0000313|EMBL:EGJ09691.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
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anamox1_curated_scaffold_769_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
19068..19877
----------------- DNA (810bp) protein (270aa) |
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMY9_9BURK
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anamox1_curated_scaffold_769_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
19980..21608
----------------- DNA (1629bp) protein (543aa) |
Peptide chain release factor 3 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMY1_9BURK
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
prfC; peptide chain release factor RF-3 PrfC
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anamox1_curated_scaffold_769_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21736..21999
----------------- DNA (264bp) protein (88aa) |
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00037F2C8E
Uncharacterized protein {ECO:0000313|EMBL:GAD24081.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
CopG family transcriptional regulator
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anamox1_curated_scaffold_769_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21980..22462
----------------- DNA (483bp) protein (161aa) |
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00036DDBC9
putative nucleic acid-binding protein, contains PIN domain
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anamox1_curated_scaffold_769_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
22586..23494
----------------- DNA (909bp) protein (303aa) |
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ubiA; 4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate octaprenyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTB7_9BURK
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anamox1_curated_scaffold_769_25
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
23558..24511
----------------- DNA (954bp) protein (318aa) |
TRAP transporter solute receptor, TAXI family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIE2_9BURK
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EHR71762.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TRAP transporter solute receptor, TAXI family precursor
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anamox1_curated_scaffold_769_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
24606..26795
----------------- DNA (2190bp) protein (730aa) |
TRAP transporter, 4TM/12TM fusion protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIE1_9BURK
TRAP transporter, 4TM/12TM fusion family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
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anamox1_curated_scaffold_769_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
26792..27430
----------------- DNA (639bp) protein (213aa) |
FMN-binding negative transcriptional regulator Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y573_LEPCP
FMN-binding negative transcriptional regulator
FMN-binding negative transcriptional regulator {ECO:0000313|EMBL:ACB32303.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
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anamox1_curated_scaffold_769_28
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
27609..27869
----------------- DNA (261bp) protein (87aa) |
hypothetical protein Tax=Curvibacter lanceolatus RepID=UPI00037ABF75
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACB32304.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
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anamox1_curated_scaffold_769_29
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(27900..28820)
----------------- DNA (921bp) protein (307aa) |
LysR family transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMX7_9BURK
oxyR; DNA-binding transcriptional regulator OxyR
LysR family transcriptional regulator {ECO:0000313|EMBL:EGJ09695.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
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anamox1_curated_scaffold_769_30
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28852..30945)
----------------- DNA (2094bp) protein (698aa) |
recG; ATP-dependent DNA helicase RecG (EC:3.6.4.12)
ATP-dependent DNA helicase RecG Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMZ0_9BURK
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EGJ09708.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
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