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PLM4_32_coex_redo_sep16_scaffold_672_12

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: comp(12939..13541)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor Tax=gamma proteobacterium BDW918 RepID=I2JGF5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 29.9
  • Coverage: 177.0
  • Bit_score: 76
  • Evalue 2.10e-11
RNA polymerase sigma factor CarQ {ECO:0000313|EMBL:GAO33746.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 181.0
  • Bit_score: 85
  • Evalue 8.40e-14
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 166.0
  • Bit_score: 71
  • Evalue 1.90e-10

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Taxonomy

Ferriphaselus amnicola → Ferriphaselus → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGGACAAGCTCGCGTTCATGCGCGCCTGCCGTGAGGGCGGCGGAGAGATCGAAGACGCCCTGCGGGCGCTCGACAGATCGTTCTTCGCGACGCTCCACCGCGAGTGCCATCGGGCGGTCCGCGACTCGGACGCCGCGTACGACCTCGTCCAGGAGACGTTCATCAAGGTCTGGCAGCGCTGCGCGACGTTCCGCGGCGACTCGGAGCTGATCCCGTGGATCCGCTCCATCCTCCGTCACGGCGTCCTCGATCACCTGCGCCGGCGCGGGAAGGAGGTCCCGATGGAAGATGAGGAAGGGACGCTCCGCGAGGTGGAGCGCACGGTCGCGGGGCAGACCGACGAGCCCGAGGATCCGGTGCGCCGCCGTGAGCTCGACGCCTGCTTCGCGCGATGCTGGAAGCGCTTCGAGGACCAAGCGCCCGCGCACGCGACCGCGATGTCGTGGATCGTGGAGGACGGGTTGAACAACGAGCAGATCGCCGCGATCCTCGGACGCACGCCGGGCGCCACCCGGGAATTCGTATCGCAGTGCCGGAAGAAGGCGCGCGTGTACCTCGCGGAGTGGTACGCCCTCGCCTCGGCGCGTGGAGAGACCGCATGA
PROTEIN sequence
Length: 201
VDKLAFMRACREGGGEIEDALRALDRSFFATLHRECHRAVRDSDAAYDLVQETFIKVWQRCATFRGDSELIPWIRSILRHGVLDHLRRRGKEVPMEDEEGTLREVERTVAGQTDEPEDPVRRRELDACFARCWKRFEDQAPAHATAMSWIVEDGLNNEQIAAILGRTPGATREFVSQCRKKARVYLAEWYALASARGETA*