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PLM3_127_b2_sep16_scaffold_7178

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7178_1
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(3..830)
-----------------
DNA (828bp)
protein (276aa)
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RND family metal ion efflux pump inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_7178_2
unknown

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comp(935..1318)
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7178_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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1570..1860
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein bin=bin7_NC10_sister species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_7178_4
unknown

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comp(1974..2543)
-----------------
DNA (570bp)
protein (190aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7178_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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3071..3517
-----------------
DNA (447bp)
protein (149aa)
putative transcriptional regulator bin=bin7_NC10_sister species=Ornithinimicrobium pekingense genus=Ornithinimicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
putative transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_7178_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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3517..3687
-----------------
DNA (171bp)
protein (57aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_7178_7
unknown

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comp(4002..4109)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7178_8

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comp(4109..4519)
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK81065.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=2669483 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PLM3_127_b2_sep16_scaffold_7178_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4516..4725)
-----------------
DNA (210bp)
protein (70aa)
Mercury ion transport protein MerF bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_7178_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4735..4986)
-----------------
DNA (252bp)
protein (84aa)
id=2669476 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_7178_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5408..6505)
-----------------
DNA (1098bp)
protein (366aa)
Alkylmercury lyase family protein bin=GWC2_Methylomirabilis_70_16 species=Rhodococcus opacus genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative alkylmercury lyase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_7178_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6552..6908
-----------------
DNA (357bp)
protein (119aa)
GTPase (EC:3.6.1.-)
Predicted GTPase bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 12 items

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