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PLM3_127_b2_sep16_scaffold_1427

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1427_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2..1549)
-----------------
DNA (1548bp)
protein (516aa)
Glycosyl transferase family protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7G7_SPHTD
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:ACZ39813.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_1427_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1711..2940
-----------------
DNA (1230bp)
protein (410aa)
amidohydrolase Tax=Sporichthya polymorpha RepID=UPI00036FF3CE
Uncharacterized protein {ECO:0000313|EMBL:ETX08064.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1427_3
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2937..3848
-----------------
DNA (912bp)
protein (304aa)
5,10-methylenetetrahydromethanopterin reductase Tax=Streptomyces rapamycinicus RepID=UPI00038310C1
5,10-methylenetetrahydromethanopterin reductase
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:AGP53452.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM3_127_b2_sep16_scaffold_1427_4
unknown

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3860..3991
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1427_5
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4018..4866
-----------------
DNA (849bp)
protein (283aa)
hypothetical protein Tax=Massilia niastensis RepID=UPI00036C80AF
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
PLM3_127_b2_sep16_scaffold_1427_6
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4917..5168
-----------------
DNA (252bp)
protein (84aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036029A0
Putative permease {ECO:0000313|EMBL:CCH77770.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1427_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5384..6403)
-----------------
DNA (1020bp)
protein (340aa)
Extracellular solute-binding protein family 1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A431_STAND
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADH87851.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM3_127_b2_sep16_scaffold_1427_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6415..6555)
-----------------
DNA (141bp)
protein (47aa)
Alpha/beta hydrolase fold protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A430_STAND
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADH87850.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM3_127_b2_sep16_scaffold_1427_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6652..7740)
-----------------
DNA (1089bp)
protein (363aa)
ABC transporter related protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A429_STAND
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADH87849.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM3_127_b2_sep16_scaffold_1427_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7749..9461)
-----------------
DNA (1713bp)
protein (571aa)
Binding-protein-dependent transport systems inner membrane component Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A428_STAND
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADH87848.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM3_127_b2_sep16_scaffold_1427_11
RLO_RIF02_62_27, RIF2, Bacteria

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9528..10919
-----------------
DNA (1392bp)
protein (464aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PA60_DESSD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3_127_b2_sep16_scaffold_1427_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11030..11821)
-----------------
DNA (792bp)
protein (264aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2K6W1_9PROT
L-proline 4-hydroxylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_1427_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(11866..12195)
-----------------
DNA (330bp)
protein (110aa)
Carboxymuconolactone decarboxylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Carboxymuconolactone decarboxylase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1427_14
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(12312..13310)
-----------------
DNA (999bp)
protein (333aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XUB7_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_127_b2_sep16_scaffold_1427_15
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13459..14109)
-----------------
DNA (651bp)
protein (217aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00036588F5
PPO candidate 1 {ECO:0000313|EMBL:EXJ14809.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
PLM3_127_b2_sep16_scaffold_1427_16
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14136..16301)
-----------------
DNA (2166bp)
protein (722aa)
Thiol:disulfide interchange protein DsbD, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI6_RHOCS
dsbD; thiol:disulfide interchange protein DsbD
Thiol:disulfide interchange protein DsbD, putative {ECO:0000313|EMBL:ACI98072.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_127_b2_sep16_scaffold_1427_17
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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16406..17545
-----------------
DNA (1140bp)
protein (380aa)
enterotoxin Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00036C7E2E
vitamin-B12 independent methionine synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_1427_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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17732..18199
-----------------
DNA (468bp)
protein (156aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1427_19
unknown

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18196..18303
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

Displaying 19 items

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