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PLM3_127_b2_sep16_scaffold_2287

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2287_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2..445
DNA (444bp) protein (148aa)
ATP-grasp protein-like protein bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ATP-grasp protein-like protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2287_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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460..729
DNA (270bp) protein (90aa)
id=14426199 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2287_3
bacterium UASB270, Bacteria

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744..1982
DNA (1239bp) protein (413aa)
Diaminopimelate decarboxylase Tax=Desulfobacter postgatei 2ac9 RepID=I5B269_9DELT
Decarboxylase, pyridoxal-dependent {ECO:0000313|EMBL:GAK56883.1}; species="Bacteria.;" source="bacterium UASB270.;"
Orn/DAP/Arg decarboxylase 2
PLM3_127_b2_sep16_scaffold_2287_4

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2083..3213
DNA (1131bp) protein (377aa)
Glycosyl transferase group 1 protein {ECO:0000313|EMBL:EKE20157.1}; EC=2.4.-.- {ECO:0000313|EMBL:EKE20157.1};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380522D
group 1 glycosyl transferase
PLM3_127_b2_sep16_scaffold_2287_5
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3207..3482
DNA (276bp) protein (92aa)
Phenylacetate-coenzyme A ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000313|EMBL:AKB42298.1}; EC=6.2.1.30 {ECO:0000313|EMBL:AKB42298.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
Phenylacetate--CoA ligase Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KP89_ARCVS
PLM3_127_b2_sep16_scaffold_2287_6
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3492..4475
DNA (984bp) protein (328aa)
Coenzyme F390 synthetase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX35_METHD
coenzyme F390 synthetase
Coenzyme F390 synthetase {ECO:0000313|EMBL:AGB49686.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
PLM3_127_b2_sep16_scaffold_2287_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4871..6004
DNA (1134bp) protein (378aa)
Glycosyl transferase, group 1 bin=GWF2_Ignavibacteria_35_20 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glycosyl transferase, group 1
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3_127_b2_sep16_scaffold_2287_8
R_OD1_Giovannonibacteria_46_20, Giovannonibacteria, Parcubacteria, Bacteria

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6007..6900
DNA (894bp) protein (298aa)
Sulfotransferase Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RED4_METVM
sulfotransferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_46_20_curated
PLM3_127_b2_sep16_scaffold_2287_9
unknown

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7308..7427
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2287_10
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7536..8957
DNA (1422bp) protein (474aa)
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TB63_AMYOR
Uncharacterized protein {ECO:0000313|EMBL:BAQ66474.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
type I phosphodiesterase/nucleotide pyrophosphatase
PLM3_127_b2_sep16_scaffold_2287_11
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8945..10195
DNA (1251bp) protein (417aa)
Uncharacterized protein Tax=Clostridium kluyveri RepID=B9E5U0_CLOK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH07865.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
PLM3_127_b2_sep16_scaffold_2287_12
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10209..11345
DNA (1137bp) protein (379aa)
Polysaccharide pyruvyl transferase CsaB Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVC1_9FIRM
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:KGF37011.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
polysaccharide pyruvyl transferase CsaB
PLM3_127_b2_sep16_scaffold_2287_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11479..12726
DNA (1248bp) protein (416aa)
Polysaccharide pyruvyl transferase CsaB {ECO:0000313|EMBL:CCQ96818.1}; EC=2.-.-.- {ECO:0000313|EMBL:CCQ96818.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Polysaccharide pyruvyl transferase CsaB Tax=Clostridium ultunense Esp RepID=M1ZFC1_9CLOT
csaB; polysaccharide pyruvyl transferase CsaB
PLM3_127_b2_sep16_scaffold_2287_14
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12877..14004
DNA (1128bp) protein (376aa)
Putative Glycosyl transferase, group 1 bin=GWF2_Ignavibacteria_35_20 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative glycosyl transferase, group 1
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3_127_b2_sep16_scaffold_2287_15
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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14010..15632
DNA (1623bp) protein (541aa)
Type I phosphodiesterase/nucleotide pyrophosphatase bin=GWF2_Ignavibacteria_35_20 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3_127_b2_sep16_scaffold_2287_16
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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15748..17283
DNA (1536bp) protein (512aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Thaumarchaeota archaeon SCGC AB-539-E09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3_127_b2_sep16_scaffold_2287_17
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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17394..18989
DNA (1596bp) protein (532aa)
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase bin=GWF2_Ignavibacteria_35_20 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3_127_b2_sep16_scaffold_2287_18
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19013..20038
DNA (1026bp) protein (342aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=unknown genus=Halothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
aldo/keto reductase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3_127_b2_sep16_scaffold_2287_19
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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20129..21025
DNA (897bp) protein (299aa)
Glycosyl transferase family 2 bin=GWF2_Ignavibacteria_35_20 species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative glycosyltransferase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3_127_b2_sep16_scaffold_2287_20
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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21063..22670
DNA (1608bp) protein (536aa)
Type I phosphodiesterase / nucleotide pyrophosphatase superfamily Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VM39_9CYAN
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3_127_b2_sep16_scaffold_2287_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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22673..23656
DNA (984bp) protein (328aa)
aldo/keto reductase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
aldo/keto reductase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2287_22
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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23746..24585
DNA (840bp) protein (280aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2287_23
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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24751..25683
DNA (933bp) protein (311aa)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2287_24
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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25674..26666
DNA (993bp) protein (331aa)
FG-GAP repeat domain protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2287_25
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(26721..27404)
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein bin=bin1_lowGC species=Clostridium sp. CAG:306 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
ABC transporter
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2287_26
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(27409..27636)
DNA (228bp) protein (76aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
Displaying 26 items

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