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PLM3_127_b2_sep16_scaffold_9023

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9023_1
unknown

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comp(231..425)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9023_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1059..2177
DNA (1119bp) protein (373aa)
AAA ATPase bin=bin1_lowGC species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
AAA ATPase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2200..3126
DNA (927bp) protein (309aa)
fmt; methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] bin=bin1_lowGC species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3216..3584)
DNA (369bp) protein (123aa)
hypothetical protein bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3586..4434)
DNA (849bp) protein (283aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23) bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4539..5567)
DNA (1029bp) protein (343aa)
hypothetical protein; K02836 peptide chain release factor 2 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
LigA protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

5794..6096
DNA (303bp) protein (101aa)
serine--glyoxylate transaminase (EC:2.6.1.45) bin=bin1_lowGC species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
aminotransferase class v
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6116..6739
DNA (624bp) protein (208aa)
serine--glyoxylate transaminase (EC:2.6.1.45) bin=bin1_lowGC species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
serine--glyoxylate transaminase (EC:2.6.1.45)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6754..6945)
DNA (192bp) protein (64aa)
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family bin=bin1_lowGC species=Anoxybacillus sp. DT3-1 genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6942..7670)
DNA (729bp) protein (243aa)
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family bin=bin1_lowGC species=Anoxybacillus sp. DT3-1 genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
czcD; cadmium, cobalt and zinc/H(+)-K(+) antiporter CzcD
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(7940..9571)
DNA (1632bp) protein (544aa)
ilvB; acetolactate synthase; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_12
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(9623..9904)
DNA (282bp) protein (94aa)
id=14424986 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_9023_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9943..10284)
DNA (342bp) protein (114aa)
id=14424987 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_14
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(10372..10770)
DNA (399bp) protein (133aa)
chorismate synthase (EC:4.2.3.5) bin=bin1_lowGC species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
aroC; chorismate synthase (EC:4.2.3.5)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_9023_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10743..11303)
DNA (561bp) protein (187aa)
chorismate synthase (EC:4.2.3.5) bin=bin1_lowGC species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
chorismate synthase (EC:4.2.3.5)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_16
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(11354..12343)
DNA (990bp) protein (330aa)
putative dihydroflavanol 4-reductase (EC:1.1.1.219)
Hopanoid-associated sugar epimerase Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0FGX0_9LEPT
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_9023_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(12460..13722)
DNA (1263bp) protein (421aa)
RNA methyltransferase, TrmA family (EC:2.1.1.35); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
RNA methyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9023_18
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

14097..15059
DNA (963bp) protein (321aa)
Quinone oxidoreductase, YhdH/YhfP family Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E494_FLESM
YhdH/YhfP family quinone oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_9023_19
unknown

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15050..15148
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9023_20
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15349..16146)
DNA (798bp) protein (266aa)
HupE / UreJ protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y9D6_THIV6
HupE / UreJ protein
HupE / UreJ protein {ECO:0000313|EMBL:AFL73604.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
Displaying 20 items

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